RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 AURKCQ9UQB9 309 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 NPIPA5A0A0B4J1W7 369 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 TMEM200CA6NKL6 621 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 NPIPA7E9PJI5 369 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 KIAA0513O60268 411 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 REM1O75628 298 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 MFN2O95140 757 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 GPIP06744 558 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 NPIPA8P0DM63 369 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 KRT20P35900 424 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 PSMD4P55036 377 aaKnown RBP16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 PSPHP78330 225 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 Q0VFX4 171 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 ELOAQ14241 798 aaKnown RBP16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 ATP1A1-AS1Q5TC04 95 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 KBTBD2Q8IY47 623 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 ADGRG5Q8IZF4 528 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 TAGAPQ8N103 731 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 SPPL2AQ8TCT8 520 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 CANT1Q8WVQ1 401 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 LZICQ8WZA0 190 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 ZG16BQ96DA0 208 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 SEPHS2Q99611 448 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 MYOTQ9UBF9 498 aa16.44■□□□□ 0.22
PTCHD3-202ENST00000622555 TLX3O43711 291 aaPredicted RBP16.43■□□□□ 0.22
PTCHD3-202ENST00000622555 IL33O95760 270 aa16.43■□□□□ 0.22
PTCHD3-202ENST00000622555 SERPINA7P05543 415 aa16.43■□□□□ 0.22
PTCHD3-202ENST00000622555 GUSBP08236 651 aa16.43■□□□□ 0.22
PTCHD3-202ENST00000622555 UMPSP11172 480 aa16.43■□□□□ 0.22
PTCHD3-202ENST00000622555 ABCD3P28288 659 aa16.43■□□□□ 0.22
PTCHD3-202ENST00000622555 IL12BP29460 328 aa16.43■□□□□ 0.22
PTCHD3-202ENST00000622555 SELENOWP63302 87 aa16.43■□□□□ 0.22
PTCHD3-202ENST00000622555 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.43■□□□□ 0.22
PTCHD3-202ENST00000622555 DCAF10Q5QP82 559 aa16.43■□□□□ 0.22
PTCHD3-202ENST00000622555 PEX5LQ8IYB4 626 aa16.43■□□□□ 0.22
PTCHD3-202ENST00000622555 ZNF248Q8NDW4 579 aa16.43■□□□□ 0.22
PTCHD3-202ENST00000622555 DIO2Q92813 273 aa16.43■□□□□ 0.22
PTCHD3-202ENST00000622555 POP5Q969H6 163 aaKnown RBP16.43■□□□□ 0.22
PTCHD3-202ENST00000622555 OMA1Q96E52 524 aa16.43■□□□□ 0.22
PTCHD3-202ENST00000622555 HSH2DQ96JZ2 352 aa16.43■□□□□ 0.22
PTCHD3-202ENST00000622555 UGT2B28Q9BY64 529 aa16.43■□□□□ 0.22
PTCHD3-202ENST00000622555 TRIM45Q9H8W5 580 aaPredicted RBP16.43■□□□□ 0.22
PTCHD3-202ENST00000622555 NKX2-8O15522 239 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 OR2J2O76002 312 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 PRKAR1AP10644 381 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 WT1P19544 449 aaPredicted RBP16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 GTF2A1P52655 376 aaPredicted RBP16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 FAM98BQ52LJ0 330 aaKnown RBP16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 FKBP9P1Q75LS8 142 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 VTCN1Q7Z7D3 282 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 OR52P1PQ8NH57 321 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 SLC22A8Q8TCC7 542 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 RASSF5Q8WWW0 418 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 PMM1Q92871 262 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 SLC47A1Q96FL8 570 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 PYURFQ96I23 114 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 FER1L6-AS2Q96M78 137 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 ADOQ96SZ5 270 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 DOHHQ9BU89 302 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 NPFFR2Q9Y5X5 522 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 AGAP5A6NIR3 686 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 TMEM229AB2RXF0 380 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 CASQ2O14958 399 aaPredicted RBP16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 KLK10O43240 276 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 NADKO95544 446 aaPredicted RBP16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 RPSAP08865 295 aaKnown RBP16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 PABPC4LP0CB38 370 aaKnown RBP16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 CD247P20963 164 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 SLC7A1P30825 629 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 CHRNB3Q05901 458 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 DUSP7Q16829 419 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 ZNF311Q5JNZ3 666 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 FCRLBQ6BAA4 426 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 ZFP1Q6P2D0 407 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 VRK2Q86Y07 508 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 SLCO4A1Q96BD0 722 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 THOC3Q96J01 351 aaKnown RBP16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 CCM2LQ9NUG4 571 aaPredicted RBP16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 BAG5Q9UL15 447 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 IFT52Q9Y366 437 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 AP4S1Q9Y587 144 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 PCDHGA10Q9Y5H3 936 aa16.42■□□□□ 0.22
PTCHD3-202ENST00000622555 MED13Q9UHV7 2174 aa16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 CENPVL1A0A0U1RR11 272 aa16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 ZNF891A8MT65 544 aaPredicted RBP16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 TSPAN2O60636 221 aa16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 ZNF354AO60765 605 aaPredicted RBP16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 BAG2O95816 211 aa16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 DBIP07108 87 aaKnown RBP16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 ADRB1P08588 477 aa16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 IL7RP16871 459 aa16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 RPS4Y1P22090 263 aaKnown RBP16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 DCTP40126 519 aa16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 CHAF1BQ13112 559 aa16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 AIMP2Q13155 320 aaKnown RBP16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 LARS2Q15031 903 aaKnown RBP16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 TBCELQ5QJ74 424 aa16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 AP1ARQ63HQ0 302 aa16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 RPS19BP1Q86WX3 136 aaKnown RBP16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 SLC5A8Q8N695 610 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms