RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 SPAG6O75602 509 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 PRAMEF12O95522 483 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 IQCF3P0C7M6 154 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 GPR89BP0CG08 455 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 SDC1P18827 310 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 ATP6V1C1P21283 382 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 PAX7P23759 505 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 PLOD1Q02809 727 aaPredicted RBP3.87□□□□□ -1.79
CPNE3-213ENST00000622183 MICAQ29983 383 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 CELF3Q5SZQ8 465 aaKnown RBP3.87□□□□□ -1.79
CPNE3-213ENST00000622183 DCST2Q5T1A1 773 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 ATAD3BQ5T9A4 648 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 LGSNQ5TDP6 509 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 STAC2Q6ZMT1 411 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 LANCL3Q6ZV70 420 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 DPY19L4Q7Z388 723 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 SLC25A42Q86VD7 318 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 UNC5CLQ8IV45 518 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 OR6T1Q8NGN1 323 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 ZNF671Q8TAW3 534 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 RAET1EQ8TD07 263 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 SPRYD4Q8WW59 207 aaPredicted RBP3.87□□□□□ -1.79
CPNE3-213ENST00000622183 SOSTQ9BQB4 213 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 TMEM121Q9BTD3 319 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 ALG12Q9BV10 488 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 NT5C3AQ9H0P0 336 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 EXTL2Q9UBQ6 330 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 DUSP12Q9UNI6 340 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 SMC3Q9UQE7 1217 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 GMPPBQ9Y5P6 360 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 MAGEB3O15480 346 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 LRRTM2O43300 516 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 LCMT2O60294 686 aaKnown RBP3.86□□□□□ -1.79
CPNE3-213ENST00000622183 RPA2P15927 270 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 NT5EP21589 574 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 CA8P35219 290 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 CHI3L1P36222 383 aaPredicted RBP3.86□□□□□ -1.79
CPNE3-213ENST00000622183 RPL4P36578 427 aaKnown RBP3.86□□□□□ -1.79
CPNE3-213ENST00000622183 ELK3P41970 407 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 OR1D4P47884 311 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 ATXN7L3Q14CW9 347 aaPredicted RBP3.86□□□□□ -1.79
CPNE3-213ENST00000622183 MAPK6Q16659 721 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 PPP1R3AQ16821 1122 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 SCYL2Q6P3W7 929 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 CCBE1Q6UXH8 406 aaPredicted RBP3.86□□□□□ -1.79
CPNE3-213ENST00000622183 CYS1Q717R9 158 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 LRRC70Q7Z2Q7 622 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 VASH2Q86V25 355 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 TMEM17Q86X19 198 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 SLC22A18ASQ8N1D0 253 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 OR52M1Q8NGK5 317 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 PNPT1Q8TCS8 783 aaKnown RBP3.86□□□□□ -1.79
CPNE3-213ENST00000622183 SLC5A11Q8WWX8 675 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 TOMM40LQ969M1 308 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 SENP8Q96LD8 212 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 POLR3FQ9H1D9 316 aaPredicted RBP3.86□□□□□ -1.79
CPNE3-213ENST00000622183 MEAF6Q9HAF1 191 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 MEPEQ9NQ76 525 aaPredicted RBP3.86□□□□□ -1.79
CPNE3-213ENST00000622183 EXOSC3Q9NQT5 275 aaKnown RBP3.86□□□□□ -1.79
CPNE3-213ENST00000622183 IMPAD1Q9NX62 359 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 ELOVL2Q9NXB9 296 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 MRPL39Q9NYK5 338 aaKnown RBP3.86□□□□□ -1.79
CPNE3-213ENST00000622183 ARMCX1Q9P291 453 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 TBK1Q9UHD2 729 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 ANAPC7Q9UJX3 599 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 GSTK1Q9Y2Q3 226 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 OR10H1Q9Y4A9 318 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 SPACA6W5XKT8 324 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 SNED1Q8TER0 1413 aa3.86□□□□□ -1.79
CPNE3-213ENST00000622183 FAM74A7A6NL05 159 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 ZSCAN12O43309 604 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 BCAS1O75363 584 aaPredicted RBP3.85□□□□□ -1.79
CPNE3-213ENST00000622183 TRIM3O75382 744 aaPredicted RBP3.85□□□□□ -1.79
CPNE3-213ENST00000622183 NEBLO76041 1014 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 TM7SF2O76062 418 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 KBTBD11O94819 623 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 RHOBTB1O94844 696 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 KIAA0754O94854 1291 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 VENTXO95231 258 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 SERPINB2P05120 415 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 TBXA2RP21731 343 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 RGS4P49798 205 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 ARHGDIBP52566 201 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 NTHL1P78549 312 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 PJVKQ0ZLH3 352 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 CRMP1Q14194 572 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 LTB4RQ15722 352 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 CHI3L2Q15782 390 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 CAMK4Q16566 473 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 FAM74A3Q4VXF1 159 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 CFAP157Q5JU67 520 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 RABGAP1LQ5R372 815 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 BLOC1S2Q6QNY1 142 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 IFNEQ86WN2 208 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 POM121L12Q8N7R1 296 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 ZSCAN4Q8NAM6 433 aaPredicted RBP3.85□□□□□ -1.79
CPNE3-213ENST00000622183 STEAP2Q8NFT2 490 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 OR2T3Q8NH03 318 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 RLN3Q8WXF3 142 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 MYLPFQ96A32 169 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms