RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 PM20D2Q8IYS1 436 aa16.33■□□□□ 0.2
SCAMP4-213ENST00000621748 NAXEQ8NCW5 288 aa16.33■□□□□ 0.2
SCAMP4-213ENST00000621748 TNIP2Q8NFZ5 429 aa16.33■□□□□ 0.2
SCAMP4-213ENST00000621748 PPCDCQ96CD2 204 aa16.33■□□□□ 0.2
SCAMP4-213ENST00000621748 C3orf30Q96M34 536 aa16.33■□□□□ 0.2
SCAMP4-213ENST00000621748 SIKE1Q9BRV8 207 aa16.33■□□□□ 0.2
SCAMP4-213ENST00000621748 LMF2Q9BU23 707 aaKnown RBP16.33■□□□□ 0.2
SCAMP4-213ENST00000621748 OR2B2Q9GZK3 357 aa16.33■□□□□ 0.2
SCAMP4-213ENST00000621748 FLRT3Q9NZU0 649 aa16.33■□□□□ 0.2
SCAMP4-213ENST00000621748 CBLCQ9ULV8 474 aa16.33■□□□□ 0.2
SCAMP4-213ENST00000621748 EIF3LQ9Y262 564 aaKnown RBP16.33■□□□□ 0.2
SCAMP4-213ENST00000621748 USH1CQ9Y6N9 552 aa16.33■□□□□ 0.2
SCAMP4-213ENST00000621748 FAM47E-STBD1D6RA91 191 aa16.32■□□□□ 0.2
SCAMP4-213ENST00000621748 FADS1O60427 444 aa16.32■□□□□ 0.2
SCAMP4-213ENST00000621748 DIAPH2O60879 1101 aa16.32■□□□□ 0.2
SCAMP4-213ENST00000621748 PEX11AO75192 247 aa16.32■□□□□ 0.2
SCAMP4-213ENST00000621748 IFI6P09912 130 aa16.32■□□□□ 0.2
SCAMP4-213ENST00000621748 SSTR2P30874 369 aa16.32■□□□□ 0.2
SCAMP4-213ENST00000621748 CEACAM8P31997 349 aaPredicted RBP16.32■□□□□ 0.2
SCAMP4-213ENST00000621748 FRKP42685 505 aaPredicted RBP16.32■□□□□ 0.2
SCAMP4-213ENST00000621748 KRTAP10-9P60411 292 aa16.32■□□□□ 0.2
SCAMP4-213ENST00000621748 FNDC5Q8NAU1 212 aa16.32■□□□□ 0.2
SCAMP4-213ENST00000621748 OR14L1PQ8NHC6 308 aa16.32■□□□□ 0.2
SCAMP4-213ENST00000621748 C14orf79Q96F83 325 aa16.32■□□□□ 0.2
SCAMP4-213ENST00000621748 CHMP6Q96FZ7 201 aa16.32■□□□□ 0.2
SCAMP4-213ENST00000621748 LURAP1Q96LR2 239 aa16.32■□□□□ 0.2
SCAMP4-213ENST00000621748 RTN4RQ9BZR6 473 aa16.32■□□□□ 0.2
SCAMP4-213ENST00000621748 Q9N2J8 555 aa16.32■□□□□ 0.2
SCAMP4-213ENST00000621748 EQTNQ9NQ60 294 aa16.32■□□□□ 0.2
SCAMP4-213ENST00000621748 TAS2R10Q9NYW0 307 aa16.32■□□□□ 0.2
SCAMP4-213ENST00000621748 GXYLT2A0PJZ3 443 aa16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 HSPB2A8KAH6 182 aa16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 ACTL6AO96019 429 aa16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 DDX5P17844 614 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 EFNA1P20827 205 aaPredicted RBP16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 SRD5A2P31213 254 aa16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 GABRA3P34903 492 aa16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 EVI2BP34910 448 aa16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 GPC1P35052 558 aa16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 TIMP3P35625 211 aa16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 MAP3K8P41279 467 aa16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 ASMTP46597 345 aa16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 GYS2P54840 703 aa16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 MANFP55145 182 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 GFRA1P56159 465 aa16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 MRPS22P82650 360 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 HSPB2Q16082 182 aa16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 DECR1Q16698 335 aa16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 NSUN5P2Q63ZY6 315 aa16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 LACC1Q8IV20 430 aa16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 DMRTC2Q8IXT2 367 aaPredicted RBP16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 ZBED6CLQ96FA7 236 aaPredicted RBP16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 NPHS2Q9NP85 383 aa16.31■□□□□ 0.2
SCAMP4-213ENST00000621748 AKAP9Q99996 3911 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 GMNCA6NCL1 334 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 SCO2O43819 266 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 ZIC3O60481 467 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 IL33O95760 270 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 IGKV1D-16P01601 117 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 PRPS2P11908 318 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 CPN1P15169 458 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 STARP49675 285 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 PRKAG1P54619 331 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 AQP5P55064 265 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 DLX5P56178 289 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 TLE4Q04727 773 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 ZNHIT3Q15649 155 aaPredicted RBP16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 SLC25A35Q3KQZ1 300 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 C6orf136Q5SQH8 315 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 POMZP3Q6PJE2 187 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 RELL2Q8NC24 303 aaPredicted RBP16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 NUP43Q8NFH3 380 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 ZFP28Q8NHY6 868 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 NUDT8Q8WV74 236 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 PIK3R3Q92569 461 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 HOXB13Q92826 284 aaPredicted RBP16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 MTERF3Q96E29 417 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 TRIB1Q96RU8 372 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 C1orf50Q9BV19 199 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 MEAF6Q9HAF1 191 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 ACSS1Q9NUB1 689 aaPredicted RBP16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 FGFR1OP2Q9NVK5 253 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 FAM53CQ9NYF3 392 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 NTMQ9P121 344 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 ATP6V1HQ9UI12 483 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 MED12LQ86YW9 2145 aa16.3■□□□□ 0.2
SCAMP4-213ENST00000621748 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 CD8B2A6NJW9 211 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 LBPP18428 481 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 BMP5P22003 454 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 TCEA1P23193 301 aaKnown RBP16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 DPP4P27487 766 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 LSP1P33241 339 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 RFX3P48380 749 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 ZNF136P52737 540 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 SRYQ05066 204 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 PTGR1Q14914 329 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 SF3B4Q15427 424 aaKnown RBP eCLIP16.29■□□□□ 0.24e-9■■■■□ 22.2
SCAMP4-213ENST00000621748 SMU1Q2TAY7 513 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 R3HCC1LQ7Z5L2 792 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms