RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 ZNF597Q96LX8 424 aa17.01■□□□□ 0.31
CIRBP-245ENST00000621399 CCT8L2Q96SF2 557 aa17.01■□□□□ 0.31
CIRBP-245ENST00000621399 TTTY12Q9BZ98 90 aa17.01■□□□□ 0.31
CIRBP-245ENST00000621399 TSPAN10Q9H1Z9 355 aaPredicted RBP17.01■□□□□ 0.31
CIRBP-245ENST00000621399 GALNT9Q9HCQ5 603 aa17.01■□□□□ 0.31
CIRBP-245ENST00000621399 ZFP64Q9NPA5 681 aa17.01■□□□□ 0.31
CIRBP-245ENST00000621399 FLRT3Q9NZU0 649 aa17.01■□□□□ 0.31
CIRBP-245ENST00000621399 SPENQ96T58 3664 aaKnown RBP17■□□□□ 0.31
CIRBP-245ENST00000621399 LOC100653049A0A140TA62 436 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 NPIPA5E9PKD4 350 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 CLIC1O00299 241 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 FADS1O60427 444 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 KRT34O76011 436 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 GLSO94925 669 aaPredicted RBP17■□□□□ 0.31
CIRBP-245ENST00000621399 AK1P00568 194 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 LCN1P31025 176 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 EVI2BP34910 448 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 PTGDSP41222 190 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 CRATP43155 626 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 GRAMD1BQ3KR37 738 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 COX20Q5RI15 118 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 DDX59Q5T1V6 619 aaKnown RBP eCLIP17■□□□□ 0.31
CIRBP-245ENST00000621399 ZAR1Q86SH2 424 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 RETREG3Q86VR2 466 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 SLC22A16Q86VW1 577 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 DPP10Q8N608 796 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 OR4C3Q8NH37 302 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 TMEM41AQ96HV5 264 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 SDF2Q99470 211 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 SLX1AQ9BQ83 275 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 SLC25A37Q9NYZ2 338 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17■□□□□ 0.31
CIRBP-245ENST00000621399 NPIPA1Q9UND3 350 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 ABCG2Q9UNQ0 655 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 ARL2BPQ9Y2Y0 163 aa17■□□□□ 0.31
CIRBP-245ENST00000621399 NUP214P35658 2090 aaPredicted RBP17■□□□□ 0.31
CIRBP-245ENST00000621399 LRRC3CA6NJW4 275 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 HMGN4O00479 90 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 GNB5O14775 395 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 SCO2O43819 266 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 SHOX2O60902 331 aaPredicted RBP16.99■□□□□ 0.31
CIRBP-245ENST00000621399 UNC5CO95185 931 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 HPGDP15428 266 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 HOXB9P17482 250 aaPredicted RBP16.99■□□□□ 0.31
CIRBP-245ENST00000621399 MAGEA8P43361 318 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 MVDP53602 400 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 FOXK1P85037 733 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 NFYCQ13952 458 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 CYLC2Q14093 348 aaPredicted RBP16.99■□□□□ 0.31
CIRBP-245ENST00000621399 ARHGAP11BQ3KRB8 267 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 MMEL1Q495T6 779 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 HEPHL1Q6MZM0 1159 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 DLEU7Q6UYE1 221 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 DHDDSQ86SQ9 333 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 ATCAYQ86WG3 371 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 SNX32Q86XE0 403 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 SIAH3Q8IW03 269 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 MSRB3Q8IXL7 192 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 CHDHQ8NE62 594 aaPredicted RBP16.99■□□□□ 0.31
CIRBP-245ENST00000621399 OR52N2Q8NGI0 321 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 RNF138Q8WVD3 245 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 TBL1XR1Q9BZK7 514 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 RAD21L1Q9H4I0 556 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 UBQLN4Q9NRR5 601 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 VAPAQ9P0L0 249 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 B4GALT7Q9UBV7 327 aa16.99■□□□□ 0.31
CIRBP-245ENST00000621399 FBP2O00757 339 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 STX11O75558 287 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 FAM107AO95990 144 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 ETFAP13804 333 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 EDN3P14138 238 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 TBXA2RP21731 343 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 STX5Q13190 355 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 HYAL4Q2M3T9 481 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 FLYWCH1Q4VC44 716 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 TIGD3Q6B0B8 471 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 MARCH3Q86UD3 253 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 TMEM251Q8N6I4 163 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 OR1J4Q8NGS1 313 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 ROPN1LQ96C74 230 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 NTNG2Q96CW9 530 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 GNRHR2Q96P88 292 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 CCDC106Q9BWC9 280 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 HOXD1Q9GZZ0 328 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 DEFB127Q9H1M4 99 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 SDHAF3Q9NRP4 125 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 SEC14L3Q9UDX4 400 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 LIPT1Q9Y234 373 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 WIF1Q9Y5W5 379 aa16.98■□□□□ 0.31
CIRBP-245ENST00000621399 TRBV5-3A0A0A0MS03 114 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 BBIP1A8MTZ0 92 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 SCDO00767 359 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 SNPHO15079 494 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 FCMRO60667 390 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 WISP2O76076 250 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 OXSR1O95747 527 aaPredicted RBP16.97■□□□□ 0.31
CIRBP-245ENST00000621399 NGFRP08138 427 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 RFPL3SP0C7P2 107 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 PPIBP23284 216 aaKnown RBP16.97■□□□□ 0.31
CIRBP-245ENST00000621399 ELAVL4P26378 380 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms