RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 H6PDO95479 791 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 BCHEP06276 602 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 TFPTP0C1Z6 253 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 IL12BP29460 328 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 RFC3P40938 356 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 PTGDSP41222 190 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 PMP22Q01453 160 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 CHRNEQ04844 493 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 GRAMD1BQ3KR37 738 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 ARHGAP11BQ3KRB8 267 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 SLC6A19Q695T7 634 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 FRRS1Q6ZNA5 592 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 C16orf62Q7Z3J2 963 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 GALNTL5Q7Z4T8 443 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 Q8NA96 180 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 CHDHQ8NE62 594 aaPredicted RBP12.51□□□□□ -0.41
NEK3-210ENST00000620675 DNAJB8Q8NHS0 232 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 ARSGQ96EG1 525 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 SLC25A18Q9H1K4 315 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 GID8Q9NWU2 228 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.51□□□□□ -0.41
NEK3-210ENST00000620675 TUBD1Q9UJT1 453 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 CNOT11Q9UKZ1 510 aaKnown RBP12.51□□□□□ -0.41
NEK3-210ENST00000620675 EVPLLA8MZ36 301 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 B2RBV5 119 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 ASNA1O43681 348 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 ABCB7O75027 752 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 WISP2O76076 250 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 UTS2O95399 124 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 BMP2P12643 396 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 DNASE1L1P49184 302 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 PNLIPRP2P54317 469 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 PSME3P61289 254 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 FADDQ13158 208 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 GPR68Q15743 365 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 MAPK14Q16539 360 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 GPAT3Q53EU6 434 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 TYW3Q6IPR3 259 aaKnown RBP12.5□□□□□ -0.41
NEK3-210ENST00000620675 Q6ZS92 163 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 RNF148Q8N7C7 305 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 PAQR8Q8TEZ7 354 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 TMEM19Q96HH6 336 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 ZNF583Q96ND8 569 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 KLHDC3Q9BQ90 382 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 ZNF350Q9GZX5 532 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 SLC38A1Q9H2H9 487 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 ZNF462Q96JM2 2506 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 DUXAA6NLW8 204 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 SLC28A2O43868 658 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 SP1P08047 785 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 KRT16P08779 473 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 CASRP41180 1078 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 CASP3P42574 277 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.5□□□□□ -0.41
NEK3-210ENST00000620675 ZNF766Q5HY98 468 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 HACD2Q6Y1H2 254 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 RTL4Q6ZR62 310 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 CALHM3Q86XJ0 350 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 OR8J3Q8NGG0 315 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 NFKBIDQ8NI38 313 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 SPPL2AQ8TCT8 520 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 PCDHGB7Q9Y5F8 929 aa12.5□□□□□ -0.41
NEK3-210ENST00000620675 TTC36A6NLP5 189 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 CLDN24A6NM45 220 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 FADS1O60427 444 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 BCAS1O75363 584 aaPredicted RBP12.49□□□□□ -0.41
NEK3-210ENST00000620675 SORBS2O94875 1100 aaKnown RBP12.49□□□□□ -0.41
NEK3-210ENST00000620675 NPPAP01160 153 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 ARAFP10398 606 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 NR2F1P10589 423 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 NAGAP17050 411 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 KRT20P35900 424 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 CYP51A1Q16850 503 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 GCNT6Q5T4J0 391 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 ATAD3BQ5T9A4 648 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 OR5M10Q6IEU7 315 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 IFNEQ86WN2 208 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 SULF2Q8IWU5 870 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 ZZZ3Q8IYH5 903 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 GATSQ8NAP1 163 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 FAM156AQ8NDB6 213 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 SCMH1Q96GD3 660 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 EXD2Q9NVH0 621 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 NPIPB9F8W1W9 429 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 SCO2O43819 266 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 NME2P1O60361 137 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 GCM2O75603 506 aaPredicted RBP12.49□□□□□ -0.41
NEK3-210ENST00000620675 OXSR1O95747 527 aaPredicted RBP12.49□□□□□ -0.41
NEK3-210ENST00000620675 PRB1P04280 392 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 NME2P22392 152 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 CALB2P22676 271 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 PPIBP23284 216 aaKnown RBP12.49□□□□□ -0.41
NEK3-210ENST00000620675 AQP1P29972 269 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 EVI2BP34910 448 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 MSX2P35548 267 aaPredicted RBP12.49□□□□□ -0.41
NEK3-210ENST00000620675 TMED10P49755 219 aaKnown RBP12.49□□□□□ -0.41
NEK3-210ENST00000620675 MXRA7P84157 204 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 ZNF169Q14929 603 aaPredicted RBP12.49□□□□□ -0.41
NEK3-210ENST00000620675 FLYWCH1Q4VC44 716 aa12.49□□□□□ -0.41
NEK3-210ENST00000620675 RNFT1Q5M7Z0 435 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms