RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 NUP43Q8NFH3 380 aa19.85■□□□□ 0.77
TRAF4-217ENST00000618771 ZPLD1Q8TCW7 415 aa19.85■□□□□ 0.77
TRAF4-217ENST00000618771 GPR151Q8TDV0 419 aa19.85■□□□□ 0.77
TRAF4-217ENST00000618771 HOXB13Q92826 284 aaPredicted RBP19.85■□□□□ 0.77
TRAF4-217ENST00000618771 RMND5BQ96G75 393 aaPredicted RBP19.85■□□□□ 0.77
TRAF4-217ENST00000618771 SFXN2Q96NB2 322 aa19.85■□□□□ 0.77
TRAF4-217ENST00000618771 MS4A4EQ96PG1 132 aa19.85■□□□□ 0.77
TRAF4-217ENST00000618771 C1orf50Q9BV19 199 aa19.85■□□□□ 0.77
TRAF4-217ENST00000618771 CENPHQ9H3R5 247 aa19.85■□□□□ 0.77
TRAF4-217ENST00000618771 CALHM2Q9HA72 323 aa19.85■□□□□ 0.77
TRAF4-217ENST00000618771 SSU72Q9NP77 194 aaKnown RBP19.85■□□□□ 0.77
TRAF4-217ENST00000618771 SDHAF3Q9NRP4 125 aa19.85■□□□□ 0.77
TRAF4-217ENST00000618771 NTMQ9P121 344 aa19.85■□□□□ 0.77
TRAF4-217ENST00000618771 MPDZO75970 2070 aa19.84■□□□□ 0.77
TRAF4-217ENST00000618771 GXYLT2A0PJZ3 443 aa19.84■□□□□ 0.77
TRAF4-217ENST00000618771 WDR91A4D1P6 747 aa19.84■□□□□ 0.77
TRAF4-217ENST00000618771 MBD3L4A6NDZ8 208 aaPredicted RBP19.84■□□□□ 0.77
TRAF4-217ENST00000618771 MBD3L3A6NE82 208 aaPredicted RBP19.84■□□□□ 0.77
TRAF4-217ENST00000618771 MBD3L5A6NJ08 208 aaPredicted RBP19.84■□□□□ 0.77
TRAF4-217ENST00000618771 KCNH1O95259 989 aa19.84■□□□□ 0.77
TRAF4-217ENST00000618771 HSPA4LO95757 839 aa19.84■□□□□ 0.77
TRAF4-217ENST00000618771 TCEA1P23193 301 aaKnown RBP19.84■□□□□ 0.77
TRAF4-217ENST00000618771 CLK3P49761 638 aaKnown RBP19.84■□□□□ 0.77
TRAF4-217ENST00000618771 ZNF136P52737 540 aa19.84■□□□□ 0.77
TRAF4-217ENST00000618771 SRYQ05066 204 aa19.84■□□□□ 0.77
TRAF4-217ENST00000618771 STX5Q13190 355 aa19.84■□□□□ 0.77
TRAF4-217ENST00000618771 PTGR1Q14914 329 aa19.84■□□□□ 0.77
TRAF4-217ENST00000618771 CEP85LQ5SZL2 805 aa19.84■□□□□ 0.77
TRAF4-217ENST00000618771 FADS6Q8N9I5 356 aa19.84■□□□□ 0.77
TRAF4-217ENST00000618771 CDRT4Q8N9R6 151 aa19.84■□□□□ 0.77
TRAF4-217ENST00000618771 FNDC5Q8NAU1 212 aa19.84■□□□□ 0.77
TRAF4-217ENST00000618771 OR7A2PQ8NGA2 310 aa19.84■□□□□ 0.77
TRAF4-217ENST00000618771 MBD3L2Q8NHZ7 208 aaPredicted RBP19.84■□□□□ 0.77
TRAF4-217ENST00000618771 PIK3R3Q92569 461 aa19.84■□□□□ 0.77
TRAF4-217ENST00000618771 TUBGCP3Q96CW5 907 aa19.84■□□□□ 0.77
TRAF4-217ENST00000618771 DSN1Q9H410 356 aa19.84■□□□□ 0.77
TRAF4-217ENST00000618771 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 TM9SF1O15321 606 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 EMC8O43402 210 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 LYPLA1O75608 230 aaPredicted RBP19.83■□□□□ 0.77
TRAF4-217ENST00000618771 NKX2-2O95096 273 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 UTS2O95399 124 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 SERPINE1P05121 402 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 TUBBP07437 444 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 MAP3K8P41279 467 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 STARP49675 285 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 DSCR4P56555 118 aaPredicted RBP19.83■□□□□ 0.77
TRAF4-217ENST00000618771 CHI3L2Q15782 390 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 IL23RQ5VWK5 629 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 CES4AQ5XG92 561 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 OR2M3Q8NG83 312 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 FBXO30Q8TB52 745 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 SLC9A6Q92581 669 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 GIMAP5Q96F15 307 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 TUBA1CQ9BQE3 449 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 RTN4RQ9BZR6 473 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 SLC24A3Q9HC58 644 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 ZNF629Q9UEG4 869 aaPredicted RBP19.83■□□□□ 0.77
TRAF4-217ENST00000618771 KCNN3Q9UGI6 736 aa19.83■□□□□ 0.77
TRAF4-217ENST00000618771 RPH3AQ9Y2J0 694 aaPredicted RBP19.83■□□□□ 0.77
TRAF4-217ENST00000618771 BIRC5O15392 142 aa19.82■□□□□ 0.76
TRAF4-217ENST00000618771 ITM2AO43736 263 aa19.82■□□□□ 0.76
TRAF4-217ENST00000618771 ZIC3O60481 467 aa19.82■□□□□ 0.76
TRAF4-217ENST00000618771 IGKV1D-16P01601 117 aa19.82■□□□□ 0.76
TRAF4-217ENST00000618771 ACP2P11117 423 aa19.82■□□□□ 0.76
TRAF4-217ENST00000618771 LAMP1P11279 417 aa19.82■□□□□ 0.76
TRAF4-217ENST00000618771 CHMP24386 653 aa19.82■□□□□ 0.76
TRAF4-217ENST00000618771 LHX2P50458 406 aa19.82■□□□□ 0.76
TRAF4-217ENST00000618771 ASCL1P50553 236 aa19.82■□□□□ 0.76
TRAF4-217ENST00000618771 DLX5P56178 289 aa19.82■□□□□ 0.76
TRAF4-217ENST00000618771 PRR5P85299 388 aa19.82■□□□□ 0.76
TRAF4-217ENST00000618771 MYBPHQ13203 477 aa19.82■□□□□ 0.76
TRAF4-217ENST00000618771 MLC1Q15049 377 aa19.82■□□□□ 0.76
TRAF4-217ENST00000618771 MARCH3Q86UD3 253 aa19.82■□□□□ 0.76
TRAF4-217ENST00000618771 ZIM3Q96PE6 472 aa19.82■□□□□ 0.76
TRAF4-217ENST00000618771 ZNF559Q9BR84 538 aa19.82■□□□□ 0.76
TRAF4-217ENST00000618771 TBL1XR1Q9BZK7 514 aa19.82■□□□□ 0.76
TRAF4-217ENST00000618771 MED11Q9P086 117 aa19.82■□□□□ 0.76
TRAF4-217ENST00000618771 DHRS4L1P0CG22 281 aa19.81■□□□□ 0.76
TRAF4-217ENST00000618771 ZNF708P17019 499 aa19.81■□□□□ 0.76
TRAF4-217ENST00000618771 CLDN18P56856 261 aa19.81■□□□□ 0.76
TRAF4-217ENST00000618771 ABCE1P61221 599 aaKnown RBP19.81■□□□□ 0.76
TRAF4-217ENST00000618771 GANABQ14697 944 aaKnown RBP19.81■□□□□ 0.76
TRAF4-217ENST00000618771 GRAMD1BQ3KR37 738 aa19.81■□□□□ 0.76
TRAF4-217ENST00000618771 TNFAIP8L3Q5GJ75 292 aa19.81■□□□□ 0.76
TRAF4-217ENST00000618771 CPTPQ5TA50 214 aa19.81■□□□□ 0.76
TRAF4-217ENST00000618771 MFSD12Q6NUT3 480 aa19.81■□□□□ 0.76
TRAF4-217ENST00000618771 POMZP3Q6PJE2 187 aa19.81■□□□□ 0.76
TRAF4-217ENST00000618771 CROCCP2Q86T23 111 aa19.81■□□□□ 0.76
TRAF4-217ENST00000618771 C9orf106Q8NAJ2 232 aa19.81■□□□□ 0.76
TRAF4-217ENST00000618771 SLC16A11Q8NCK7 471 aa19.81■□□□□ 0.76
TRAF4-217ENST00000618771 DUSP19Q8WTR2 217 aa19.81■□□□□ 0.76
TRAF4-217ENST00000618771 ZBTB9Q96C00 473 aa19.81■□□□□ 0.76
TRAF4-217ENST00000618771 FAM120BQ96EK7 910 aaKnown RBP19.81■□□□□ 0.76
TRAF4-217ENST00000618771 LRRC46Q96FV0 321 aa19.81■□□□□ 0.76
TRAF4-217ENST00000618771 PTGES2Q9H7Z7 377 aa19.81■□□□□ 0.76
TRAF4-217ENST00000618771 SIRT3Q9NTG7 399 aaPredicted RBP19.81■□□□□ 0.76
TRAF4-217ENST00000618771 ZCCHC3Q9NUD5 404 aaKnown RBP19.81■□□□□ 0.76
TRAF4-217ENST00000618771 ATAD3AQ9NVI7 634 aa19.81■□□□□ 0.76
TRAF4-217ENST00000618771 L3MBTL1Q9Y468 752 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms