RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 PSD4Q8NDX1 1056 aa18.1■□□□□ 0.49
UPF3A-211ENST00000618700 FAM13CQ8NE31 585 aa18.1■□□□□ 0.49
UPF3A-211ENST00000618700 OR5M3Q8NGP4 307 aa18.1■□□□□ 0.49
UPF3A-211ENST00000618700 NTNG2Q96CW9 530 aa18.1■□□□□ 0.49
UPF3A-211ENST00000618700 NSL1Q96IY1 281 aa18.1■□□□□ 0.49
UPF3A-211ENST00000618700 SDF2Q99470 211 aa18.1■□□□□ 0.49
UPF3A-211ENST00000618700 SH3GL1Q99961 368 aa18.1■□□□□ 0.49
UPF3A-211ENST00000618700 G6PC3Q9BUM1 346 aa18.1■□□□□ 0.49
UPF3A-211ENST00000618700 HES7Q9BYE0 225 aa18.1■□□□□ 0.49
UPF3A-211ENST00000618700 A4GALTQ9NPC4 353 aa18.1■□□□□ 0.49
UPF3A-211ENST00000618700 POLE3Q9NRF9 147 aa18.1■□□□□ 0.49
UPF3A-211ENST00000618700 THUMPD1Q9NXG2 353 aaKnown RBP18.1■□□□□ 0.49
UPF3A-211ENST00000618700 P2RX2Q9UBL9 471 aa18.1■□□□□ 0.49
UPF3A-211ENST00000618700 CNOT11Q9UKZ1 510 aaKnown RBP18.1■□□□□ 0.49
UPF3A-211ENST00000618700 B3GNT3Q9Y2A9 372 aa18.1■□□□□ 0.49
UPF3A-211ENST00000618700 SPTA1P02549 2419 aa18.09■□□□□ 0.49
UPF3A-211ENST00000618700 C15orf38-AP3S2A0A0A6YYH1 394 aa18.09■□□□□ 0.49
UPF3A-211ENST00000618700 CCT8L1PA6NM43 557 aa18.09■□□□□ 0.49
UPF3A-211ENST00000618700 TP53I11O14683 189 aa18.09■□□□□ 0.49
UPF3A-211ENST00000618700 SP1P08047 785 aa18.09■□□□□ 0.49
UPF3A-211ENST00000618700 ART3Q13508 389 aa18.09■□□□□ 0.49
UPF3A-211ENST00000618700 ZNF169Q14929 603 aaPredicted RBP18.09■□□□□ 0.49
UPF3A-211ENST00000618700 MAPK11Q15759 364 aa18.09■□□□□ 0.49
UPF3A-211ENST00000618700 ZNF766Q5HY98 468 aa18.09■□□□□ 0.49
UPF3A-211ENST00000618700 SLC25A25Q6KCM7 469 aa18.09■□□□□ 0.49
UPF3A-211ENST00000618700 NET1Q7Z628 596 aaPredicted RBP18.09■□□□□ 0.49
UPF3A-211ENST00000618700 ARPINQ7Z6K5 226 aa18.09■□□□□ 0.49
UPF3A-211ENST00000618700 FBXW8Q8N3Y1 598 aa18.09■□□□□ 0.49
UPF3A-211ENST00000618700 LSM14AQ8ND56 463 aaKnown RBP18.09■□□□□ 0.49
UPF3A-211ENST00000618700 FBXO27Q8NI29 283 aa18.09■□□□□ 0.49
UPF3A-211ENST00000618700 TMEM125Q96AQ2 219 aa18.09■□□□□ 0.49
UPF3A-211ENST00000618700 TRNT1Q96Q11 434 aaKnown RBP18.09■□□□□ 0.49
UPF3A-211ENST00000618700 NODALQ96S42 347 aa18.09■□□□□ 0.49
UPF3A-211ENST00000618700 HOPXQ9BPY8 73 aaPredicted RBP18.09■□□□□ 0.49
UPF3A-211ENST00000618700 THUMPD3Q9BV44 507 aaKnown RBP18.09■□□□□ 0.49
UPF3A-211ENST00000618700 TIMMDC1Q9NPL8 285 aa18.09■□□□□ 0.49
UPF3A-211ENST00000618700 CNIH4Q9P003 139 aa18.09■□□□□ 0.49
UPF3A-211ENST00000618700 LIPT1Q9Y234 373 aa18.09■□□□□ 0.49
UPF3A-211ENST00000618700 HS6ST1O60243 411 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 KIAA0513O60268 411 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 ICOSLGO75144 302 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 UBOX5O94941 541 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 UTS2O95399 124 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 CHRM4P08173 479 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 TFPTP0C1Z6 253 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 ARAFP10398 606 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 ESRRAP11474 423 aaPredicted RBP18.08■□□□□ 0.48
UPF3A-211ENST00000618700 CD46P15529 392 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 CALB2P22676 271 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 RFX3P48380 749 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 GZMMP51124 257 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 MNAT1P51948 309 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 ADRM1Q16186 407 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 SYPL1Q16563 259 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 GCNT6Q5T4J0 391 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 SLC22A10Q63ZE4 541 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 C6orf89Q6UWU4 347 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 SERPINA11Q86U17 422 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 ANKFN1Q8N957 763 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 TMCO6Q96DC7 493 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 C5orf34Q96MH7 638 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 SAP130Q9H0E3 1048 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 SLC38A1Q9H2H9 487 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 TMEM38AQ9H6F2 299 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 PROK2Q9HC23 129 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 SACM1LQ9NTJ5 587 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 FLRT3Q9NZU0 649 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 ABCG2Q9UNQ0 655 aa18.08■□□□□ 0.48
UPF3A-211ENST00000618700 ANKRD33BA6NCL7 494 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 NPIPB9F8W1W9 429 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 ADAM10O14672 748 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 FCMRO60667 390 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 STX11O75558 287 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 NGFRP08138 427 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 ATP6V1C1P21283 382 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 PTGDSP41222 190 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 RPP38P78345 283 aaKnown RBP18.07■□□□□ 0.48
UPF3A-211ENST00000618700 GRAMD1BQ3KR37 738 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 NADK2Q4G0N4 442 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 BICRALQ6AI39 1079 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 FRRS1Q6ZNA5 592 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 OLIG3Q7RTU3 272 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 CALHM3Q86XJ0 350 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 PTOV1Q86YD1 416 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 SLC15A3Q8IY34 581 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 TMEM178AQ8NBL3 297 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 GRHL3Q8TE85 626 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 SLC38A5Q8WUX1 472 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 MAL2Q969L2 176 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 PNPLA2Q96AD5 504 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 TMEM19Q96HH6 336 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 RUBCNLQ9H714 662 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 KLHL1Q9NR64 748 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 DEPPQ9NTK1 212 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 CMTM6Q9NX76 183 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 ABCD2Q9UBJ2 740 aa18.07■□□□□ 0.48
UPF3A-211ENST00000618700 KLF13Q9Y2Y9 288 aaPredicted RBP18.07■□□□□ 0.48
UPF3A-211ENST00000618700 DSPPQ9NZW4 1301 aa18.06■□□□□ 0.48
UPF3A-211ENST00000618700 A0A0G2JMM0 328 aa18.06■□□□□ 0.48
UPF3A-211ENST00000618700 A0A1W2PPB8 328 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms