RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 MRPS11P82912 194 aaKnown RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 SRYQ05066 204 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 TOMM20Q15388 145 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 ZNF239Q16600 458 aaKnown RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 SLC25A53Q5H9E4 307 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 SH2D4BQ5SQS7 431 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 C18orf63Q68DL7 685 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 TMEM108Q6UXF1 575 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 L3MBTL4Q8NA19 623 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 OR7G3Q8NG95 312 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 FNDC9Q8TBE3 224 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 WDR20Q8TBZ3 569 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 NEU4Q8WWR8 484 aaPredicted RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 OIT3Q8WWZ8 545 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 PPWD1Q96BP3 646 aaKnown RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 ZC3HAV1LQ96H79 300 aaKnown RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 LMF2Q9BU23 707 aaKnown RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 PINK1Q9BXM7 581 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 OBP2BQ9NPH6 170 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 SIRT5Q9NXA8 310 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 TMEFF2Q9UIK5 374 aaPredicted RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 DCTN4Q9UJW0 460 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 AMDHD2Q9Y303 409 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 PMF1-BGLAPU3KQ54 211 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 DNAH3Q8TD57 4116 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 IGKV3D-15A0A087WSY6 115 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 A0A1W2PQD3 144 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 TCRBV7S3A2A0A539 114 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 NPEPPSL1A6NEC2 478 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 GOLGA6L10A6NI86 522 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 GOLGA8KD6RF30 607 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 STK16O75716 305 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 IL33O95760 270 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 PTMAP06454 111 aaKnown RBP4.04□□□□□ -1.76
SNCA-213ENST00000618500 CNTFP26441 200 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 APOBEC3AP31941 199 aaPredicted RBP4.04□□□□□ -1.76
SNCA-213ENST00000618500 SLC6A8P48029 635 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 PIK3CGP48736 1102 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 CLK3P49761 638 aaKnown RBP4.04□□□□□ -1.76
SNCA-213ENST00000618500 PRR5P85299 388 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 LGALS3BPQ08380 585 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 TGFBIQ15582 683 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 GGTA1PQ4G0N0 100 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 FAM111BQ6SJ93 734 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 CES3Q6UWW8 571 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 ZNF525Q8N782 197 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 FBXO30Q8TB52 745 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 CCT6BQ92526 530 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 FAM136AQ96C01 138 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 TSPAN17Q96FV3 270 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 CERS2Q96G23 380 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 ZNF764Q96H86 408 aaPredicted RBP4.04□□□□□ -1.76
SNCA-213ENST00000618500 ZNF681Q96N22 645 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 RACGAP1Q9H0H5 632 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 GALNT9Q9HCQ5 603 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 TIGARQ9NQ88 270 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 IARS2Q9NSE4 1012 aaKnown RBP4.04□□□□□ -1.76
SNCA-213ENST00000618500 PPP4R1LQ9P1A2 415 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 CRNNQ9UBG3 495 aaPredicted RBP4.04□□□□□ -1.76
SNCA-213ENST00000618500 MRTO4Q9UKD2 239 aaKnown RBP4.04□□□□□ -1.76
SNCA-213ENST00000618500 ZNF337Q9Y3M9 751 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 PCDHB14Q9Y5E9 798 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 NBEAL1Q6ZS30 2694 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 OR5H1A6NKK0 313 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 CLDN34H7C241 214 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 PHGDHO43175 533 aaKnown RBP4.04□□□□□ -1.76
SNCA-213ENST00000618500 DNPH1O43598 174 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 TMPRSS11DO60235 418 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 PLOD3O60568 738 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 COQ9O75208 318 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 AQP8O94778 261 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 STAMBPO95630 424 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 IFNB1P01574 187 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 CCDC166P0CW27 439 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 CT45A8P0DMV1 189 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 CT45A9P0DMV2 189 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 ADRA2CP18825 462 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 GCH1P30793 250 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 EIF1P41567 113 aaKnown RBP4.04□□□□□ -1.76
SNCA-213ENST00000618500 STARP49675 285 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 RAP1GDS1P52306 607 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 POU4F1Q01851 419 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 CT45A2Q5DJT8 189 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 REP15Q6BDI9 236 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 CYP20A1Q6UW02 462 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 FRA10AC1Q70Z53 315 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 PAGE2Q7Z2X7 111 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 LUZP1Q86V48 1076 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 GLCCI1Q86VQ1 547 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 MUC15Q8N387 334 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 ARIH2OSQ8N7S6 290 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 BANPQ8N9N5 519 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 OR52B6Q8NGF0 335 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 FBF1Q8TES7 1133 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 C12orf65Q9H3J6 166 aaKnown RBP4.04□□□□□ -1.76
SNCA-213ENST00000618500 FBXO34Q9NWN3 711 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 MED29Q9NX70 200 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 NFU1Q9UMS0 254 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 SLC25A15Q9Y619 301 aa4.04□□□□□ -1.76
SNCA-213ENST00000618500 TRAV20A0A0B4J274 112 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms