RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 WWTR1Q9GZV5 400 aa13.66□□□□□ -0.22
UBXN1-218ENST00000616865 NTMQ9P121 344 aa13.66□□□□□ -0.22
UBXN1-218ENST00000616865 CORO2BQ9UQ03 480 aa13.66□□□□□ -0.22
UBXN1-218ENST00000616865 TTC36A6NLP5 189 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 EBAG9O00559 213 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 UBOX5O94941 541 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 CLPSP04118 112 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 MATN1P21941 496 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 CALB2P22676 271 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 CYB561P49447 251 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 KHKP50053 298 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 EMDP50402 254 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 GPR143P51810 404 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 NRG3P56975 720 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 GABPB1Q06547 395 aaPredicted RBP13.65□□□□□ -0.22
UBXN1-218ENST00000616865 CAPRIN1Q14444 709 aaKnown RBP13.65□□□□□ -0.22
UBXN1-218ENST00000616865 EBPQ15125 230 aaKnown RBP13.65□□□□□ -0.22
UBXN1-218ENST00000616865 GTDC1Q4AE62 458 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 SAXO2Q658L1 398 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 MFSD12Q6NUT3 480 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 ZCCHC12Q6PEW1 402 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 RNF130Q86XS8 419 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 SLC44A2Q8IWA5 706 aaPredicted RBP13.65□□□□□ -0.22
UBXN1-218ENST00000616865 C9orf40Q8IXQ3 194 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 FBXO30Q8TB52 745 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 ADAMTS15Q8TE58 950 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 ZFP90Q8TF47 636 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 LRRC58Q96CX6 371 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 SH3GL1Q99961 368 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 THUMPD3Q9BV44 507 aaKnown RBP13.65□□□□□ -0.22
UBXN1-218ENST00000616865 ITPAQ9BY32 194 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 TRIM45Q9H8W5 580 aaPredicted RBP13.65□□□□□ -0.22
UBXN1-218ENST00000616865 TPT1P8Q9HAU6 139 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 SLC6A13Q9NSD5 602 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 NDE1Q9NXR1 346 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 COQ3Q9NZJ6 369 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.65□□□□□ -0.22
UBXN1-218ENST00000616865 SLAMF8Q9P0V8 285 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 OR10H1Q9Y4A9 318 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 PCDHGB3Q9Y5G1 929 aa13.65□□□□□ -0.22
UBXN1-218ENST00000616865 WWP2O00308 870 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 NME6O75414 186 aaPredicted RBP13.64□□□□□ -0.23
UBXN1-218ENST00000616865 SOX30O94993 753 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 TRHRP34981 398 aaPredicted RBP13.64□□□□□ -0.23
UBXN1-218ENST00000616865 SOX18P35713 384 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 KRT20P35900 424 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 CRATP43155 626 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 PPICP45877 212 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 NR0B1P51843 470 aaKnown RBP13.64□□□□□ -0.23
UBXN1-218ENST00000616865 CASP9P55211 416 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 MLF1P58340 268 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 DUSP8Q13202 625 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 NNATQ16517 81 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 ATAD3BQ5T9A4 648 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 CDC73Q6P1J9 531 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 DLEU7Q6UYE1 221 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 WDR53Q7Z5U6 358 aaPredicted RBP13.64□□□□□ -0.23
UBXN1-218ENST00000616865 CD163Q86VB7 1156 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 TAGAPQ8N103 731 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 POGLUT1Q8NBL1 392 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 NUBPLQ8TB37 319 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 FAM57AQ8TBR7 257 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 SLC22A8Q8TCC7 542 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 GPR151Q8TDV0 419 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 AURKBQ96GD4 344 aaPredicted RBP13.64□□□□□ -0.23
UBXN1-218ENST00000616865 C16orf58Q96GQ5 468 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 LCORQ96JN0 433 aaPredicted RBP13.64□□□□□ -0.23
UBXN1-218ENST00000616865 LIN28AQ9H9Z2 209 aaKnown RBP13.64□□□□□ -0.23
UBXN1-218ENST00000616865 Q9N2J8 555 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 VAPAQ9P0L0 249 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 ZNF223Q9UK11 482 aaPredicted RBP13.64□□□□□ -0.23
UBXN1-218ENST00000616865 ERVK-11Q9UQG0 969 aa13.64□□□□□ -0.23
UBXN1-218ENST00000616865 HCFC1P51610 2035 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 C15orf38-AP3S2A0A0A6YYH1 394 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 TMEM247A6NEH6 219 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 DUXAA6NLW8 204 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 B2RBV5 119 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 TFECO14948 347 aaPredicted RBP13.63□□□□□ -0.23
UBXN1-218ENST00000616865 PRKNO60260 465 aaPredicted RBP13.63□□□□□ -0.23
UBXN1-218ENST00000616865 PSMG1O95456 288 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 AGR2O95994 175 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 IGFBP2P18065 325 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 PTPN6P29350 595 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 GABRA3P34903 492 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 MAGEA8P43361 318 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 MEOX1P50221 254 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 RPS26P62854 115 aaKnown RBP13.63□□□□□ -0.23
UBXN1-218ENST00000616865 TXNL4AP83876 142 aaKnown RBP13.63□□□□□ -0.23
UBXN1-218ENST00000616865 RUNDC3AQ59EK9 446 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.63□□□□□ -0.23
UBXN1-218ENST00000616865 TNFAIP8L2Q6P589 184 aaPredicted RBP13.63□□□□□ -0.23
UBXN1-218ENST00000616865 C16orf89Q6UX73 402 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 HACD2Q6Y1H2 254 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 CCDC121Q6ZUS5 278 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 ARPINQ7Z6K5 226 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 COX18Q8N8Q8 333 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 OR52N2Q8NGI0 321 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 TP53INP1Q96A56 240 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 TMEM125Q96AQ2 219 aa13.63□□□□□ -0.23
UBXN1-218ENST00000616865 OTUB1Q96FW1 271 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms