RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 ARL6Q9H0F7 186 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 FXYD6Q9H0Q3 95 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 SPG21Q9NZD8 308 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 KCMF1Q9P0J7 381 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 ZNF69Q9UC07 566 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 FKBP7Q9Y680 259 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 PGRMC2O15173 223 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 LATO43561 262 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 PSMB5P28074 263 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 PXNP49023 591 aaPredicted RBP12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 BTG1P62324 171 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 PCDH1Q08174 1060 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 SYPL1Q16563 259 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 SPIN4Q56A73 249 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 SLC8B1Q6J4K2 584 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 PGBD2Q6P3X8 592 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 KCNJ15Q99712 375 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 TRMT61BQ9BVS5 477 aaKnown RBP12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 OSGEPL1Q9H4B0 414 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 C1GALT1Q9NS00 363 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 INSL5Q9Y5Q6 135 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 ZNF98A6NK75 572 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 GFYI3L273 518 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 PI15O43692 258 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 CBX5P45973 191 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 GGTA1PQ4G0N0 100 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 ASTLQ6HA08 431 aaPredicted RBP12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 REEP3Q6NUK4 255 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 SLC30A6Q6NXT4 461 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 SMARCD3Q6STE5 483 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 KRT78Q8N1N4 520 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 SLC38A5Q8WUX1 472 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 IGSF21Q96ID5 467 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 FUZQ9BT04 418 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 PLA2G12AQ9BZM1 189 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 ELAC1Q9H777 363 aaKnown RBP12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 RC3H2Q9HBD1 1191 aaKnown RBP12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 CD93Q9NPY3 652 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 E9PQ18 207 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 LINC01387J3KSC0 135 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 SGK494L7N484 410 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 SMAD9O15198 467 aaKnown RBP12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 POP4O95707 220 aaKnown RBP12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 LRG1P02750 347 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 GLAP06280 429 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 ACVR1BP36896 505 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 GDI2P50395 445 aaKnown RBP12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 GPR85P60893 370 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 MELKQ14680 651 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 GRHL2Q6ISB3 625 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 TMEM88Q6PEY1 159 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 OXR1Q8N573 874 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 TEX47Q8TBZ9 253 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 WDR89Q96FK6 387 aaPredicted RBP12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 TEFMQ96QE5 360 aaKnown RBP12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 ZNF436Q9C0F3 470 aaPredicted RBP12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 CAPN10Q9HC96 672 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 PHF11Q9UIL8 331 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 FBXW2Q9UKT8 454 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 CSNK1G3Q9Y6M4 447 aa12.59□□□□□ -0.39
PCDHA11-202ENST00000616325 KIAA0100Q14667 2235 aaKnown RBP12.58□□□□□ -0.39
PCDHA11-202ENST00000616325 PLXNA4Q9HCM2 1894 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 HYAL3O43820 417 aaPredicted RBP12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 SPDEFO95238 335 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 MMP11P24347 488 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 MAPK8P45983 427 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 ARHGAP15Q53QZ3 475 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 C3orf38Q5JPI3 329 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 CD276Q5ZPR3 534 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 MSANTD1Q6ZTZ1 278 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 RELL2Q8NC24 303 aaPredicted RBP12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 TRMT10AQ8TBZ6 339 aaKnown RBP12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 SMAP2Q8WU79 429 aaPredicted RBP12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 HSD17B8Q92506 261 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 TAC3Q9UHF0 121 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 BTNL2Q9UIR0 455 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 SCP2D1Q9UJQ7 156 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 LIMS3P0CW19 117 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 LIMS4P0CW20 117 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 ZP3P21754 424 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 F8A1P23610 371 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 VEGFCP49767 419 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 ZNF630Q2M218 657 aaPredicted RBP12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 C6orf132Q5T0Z8 1188 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 ELP2Q6IA86 826 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 FAM198BQ6UWH4 519 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 LRRTM4Q86VH4 590 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 ZNF454Q8N9F8 522 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 OR2T4Q8NH00 348 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 ZNF671Q8TAW3 534 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 ZFPM2Q8WW38 1151 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 SCMH1Q96GD3 660 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 ZNF578Q96N58 590 aaPredicted RBP12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 OR2M2Q96R28 347 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 ISG20L2Q9H9L3 353 aaKnown RBP12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 PRDM9Q9NQV7 894 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 CXXC1Q9P0U4 656 aaPredicted RBP12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 ACSL5Q9ULC5 683 aa12.58□□□□□ -0.4
PCDHA11-202ENST00000616325 ZNF175Q9Y473 711 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms