RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 RNASE12Q5GAN4 147 aaKnown RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ANKRD54Q6NXT1 300 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 PAQR6Q6TCH4 344 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 CHMP1BQ7LBR1 199 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 SPRED2Q7Z698 418 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 CRIPAKQ8N1N5 446 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 C7orf57Q8NEG2 295 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 PTCHD1Q96NR3 888 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 GABARAPL3Q9BY60 117 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 TTTY10Q9BZA0 68 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 TRIM2Q9C040 744 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 CLEC4MQ9H2X3 399 aaPredicted RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 UBQLN3Q9H347 655 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 POLMQ9NP87 494 aaPredicted RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ICKQ9UPZ9 632 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 PLEKHM1Q9Y4G2 1056 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 SPTBN4Q9H254 2564 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 A8MV72 311 aaPredicted RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 IL1AP01583 271 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 HNRNPA2B1P22626 353 aaKnown RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ACVR1BP36896 505 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 PCBP3P57721 371 aaKnown RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 CRYZQ08257 329 aaKnown RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 MLLT11Q13015 90 aaPredicted RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ANGPT1Q15389 498 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 KCNJ8Q15842 424 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 INAVAQ3KP66 663 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 TBRG1Q3YBR2 411 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ALG10BQ5I7T1 473 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 TOR2AQ5JU69 321 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 SLC48A1Q6P1K1 146 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 C11orf88Q6PI97 169 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 FBXL6Q8N531 539 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZNF676Q8N7Q3 588 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZNF248Q8NDW4 579 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 GOT1L1Q8NHS2 421 aaPredicted RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 PHOSPHO2Q8TCD6 241 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 OR1E3Q8WZA6 343 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 MS4A6EQ96DS6 147 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ERMAPQ96PL5 475 aaPredicted RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 GABARAPL1Q9H0R8 117 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 WASH6PQ9NQA3 447 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 NCDNQ9UBB6 729 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 POU2F3Q9UKI9 436 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 STUB1Q9UNE7 303 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 PCDHGA4Q9Y5G9 962 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 C2CD3Q4AC94 2353 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZNF670-ZNF695F2Z2N8 137 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 DBIP07108 87 aaKnown RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ACSL1P33121 698 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 TRIM23P36406 574 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 NR4A2P43354 598 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 RNF144AP50876 292 aaPredicted RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 GZMMP51124 257 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 CD83Q01151 205 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 VRK2Q86Y07 508 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 GPALPP1Q8IXQ4 340 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 GDPD1Q8N9F7 314 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZNF707Q96C28 371 aaPredicted RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 AHCYL2Q96HN2 611 aaKnown RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 HSPA12BQ96MM6 686 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 DPH1Q9BZG8 443 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 IL21RQ9HBE5 538 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 HHATLQ9HCP6 504 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ENAMQ9NRM1 1142 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 MCUBQ9NWR8 336 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 NUFIP1Q9UHK0 495 aaKnown RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 YARS2Q9Y2Z4 477 aaKnown RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ENTPD2Q9Y5L3 495 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 HTR3EA5X5Y0 456 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 RAB36O95755 333 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 AK1P00568 194 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 CLEC2LP0C7M8 214 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 GSTT2P0CG29 244 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 GSTT2BP0CG30 244 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 MYOGP15173 224 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 SSTR4P31391 388 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 CTHP32929 405 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 NAA10P41227 235 aaPredicted RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 SLC1A3P43003 542 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ATP12AP54707 1039 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 RPS15AP62244 130 aaKnown RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 REEP5Q00765 189 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 TPBGQ13641 420 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 GBX1Q14549 363 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 VWA5B2Q8N398 1253 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 SLC44A3Q8N4M1 653 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 GPR32P1Q8NGA4 272 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 LINC00615Q96LM1 132 aaPredicted RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 MS4A4EQ96PG1 132 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 SIAEQ9HAT2 523 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 PAQR5Q9NXK6 330 aaPredicted RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ANKRD11Q6UB99 2663 aaPredicted RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ARHGEF17Q96PE2 2063 aaPredicted RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 A0A075B6Q4 140 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 A0A1W2PPK0 400 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 ELOA3DA6NLF2 546 aaPredicted RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 B4DGG1 531 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 HMGN4O00479 90 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms