RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 AGAP5A6NIR3 686 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 CDK4P11802 303 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 SLC6A11P48066 632 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 MAN2A2P49641 1150 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 MLLT10P55197 1068 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 PRKCDQ05655 676 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 ZNF551Q7Z340 670 aaPredicted RBP13.9□□□□□ -0.18
SNPH-203ENST00000614659 JAGN1Q8N5M9 183 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 RTCAO00442 366 aaKnown RBP13.89□□□□□ -0.19
SNPH-203ENST00000614659 HOXC11O43248 304 aaPredicted RBP13.89□□□□□ -0.19
SNPH-203ENST00000614659 AQP9O43315 295 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 PRAMEF2O60811 474 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 HYAL2Q12891 473 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 SCGB2B2Q4G0G5 96 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 KLBQ86Z14 1044 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 ASB12Q8WXK4 309 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 ZDHHC5Q9C0B5 715 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 PAQR5Q9NXK6 330 aaPredicted RBP13.89□□□□□ -0.19
SNPH-203ENST00000614659 SLC39A1Q9NY26 324 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 A0A1B0GVT2 93 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 PPP6CO00743 305 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 ERCC1P07992 297 aaPredicted RBP13.89□□□□□ -0.19
SNPH-203ENST00000614659 ARAFP10398 606 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 RACK1P63244 317 aaKnown RBP13.89□□□□□ -0.19
SNPH-203ENST00000614659 TUBB3Q13509 450 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 GRK1Q15835 563 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 OCLNQ16625 522 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 SLC22A10Q63ZE4 541 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 ZSCAN4Q8NAM6 433 aaPredicted RBP13.89□□□□□ -0.19
SNPH-203ENST00000614659 NDNFQ8TB73 568 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 CDC6Q99741 560 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 BTBD2Q9BX70 525 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 CFHR5Q9BXR6 569 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 PCDH10Q9P2E7 1040 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 GLS2Q9UI32 602 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 IGLV3-25P01717 112 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 ICAM2P13598 275 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 C1orf53Q5VUE5 145 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 LHFPL3Q86UP9 236 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 TMEM173Q86WV6 379 aaPredicted RBP13.89□□□□□ -0.19
SNPH-203ENST00000614659 TIGD4Q8IY51 512 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 OR6N2Q8NGY6 317 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 CIDECQ96AQ7 238 aaPredicted RBP13.89□□□□□ -0.19
SNPH-203ENST00000614659 OR4K3Q96R72 315 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 TTYH2Q9BSA4 534 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 TAS2R8Q9NYW2 309 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 C2orf92A0A1B0GVN3 265 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 UCHL1P09936 223 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 CD27P26842 260 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 VAMP2P63027 116 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 ID2Q02363 134 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 OR5AR1Q8NGP9 310 aa13.89□□□□□ -0.19
SNPH-203ENST00000614659 FAM46AQ96IP4 442 aaKnown RBP13.89□□□□□ -0.19
SNPH-203ENST00000614659 TRAV6A0A075B6T7 132 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 A8MVJ9 347 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 NPIPA2E9PIF3 369 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 NPIPA3F8WFD2 350 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 CSN2P05814 226 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 ZNF26P17031 533 aaPredicted RBP13.88□□□□□ -0.19
SNPH-203ENST00000614659 LHCGRP22888 699 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 EMX1Q04741 257 aaPredicted RBP13.88□□□□□ -0.19
SNPH-203ENST00000614659 XKR7Q5GH72 579 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 DCAF12Q5T6F0 453 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 OR9Q2Q8NGE9 314 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 COQ8AQ8NI60 647 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 ZNF471Q9BX82 626 aaPredicted RBP13.88□□□□□ -0.19
SNPH-203ENST00000614659 KCNK12Q9HB15 430 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 NOP16Q9Y3C1 178 aaKnown RBP13.88□□□□□ -0.19
SNPH-203ENST00000614659 C7orf72A4D263 438 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 RBBP9O75884 186 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 H2AFB2P0C5Z0 115 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 JUNBP17275 347 aaPredicted RBP13.88□□□□□ -0.19
SNPH-203ENST00000614659 MCCD1P59942 119 aaPredicted RBP13.88□□□□□ -0.19
SNPH-203ENST00000614659 PRPS1P60891 318 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 PLEKHN1Q494U1 663 aaPredicted RBP13.88□□□□□ -0.19
SNPH-203ENST00000614659 LINC00299Q6ZSB3 139 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 IGFN1Q86VF2 1251 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 PLPP6Q8IY26 295 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 ZNF101Q8IZC7 436 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 VWA5B2Q8N398 1253 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 GPR78Q96P69 363 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 C1QTNF3Q9BXJ4 246 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 C14orf119Q9NWQ9 140 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 TFAP2AP05549 437 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 LCKP06239 509 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 MRPL3P09001 348 aaKnown RBP13.88□□□□□ -0.19
SNPH-203ENST00000614659 AHRP35869 848 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 FRKP42685 505 aaPredicted RBP13.88□□□□□ -0.19
SNPH-203ENST00000614659 BMXP51813 675 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 UGT8Q16880 541 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 EIF2S3LQ2VIR3 472 aaKnown RBP13.88□□□□□ -0.19
SNPH-203ENST00000614659 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.88□□□□□ -0.19
SNPH-203ENST00000614659 PPP1R3BQ86XI6 285 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 OR6Q1Q8NGQ2 317 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 ADAM12O43184 909 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 EEF1E1O43324 174 aaKnown RBP13.88□□□□□ -0.19
SNPH-203ENST00000614659 OR7A10O76100 309 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 GRIN2CQ14957 1233 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 NSDHLQ15738 373 aa13.88□□□□□ -0.19
SNPH-203ENST00000614659 TMEM69Q5SWH9 247 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms