RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 MAPK1P28482 360 aa20.59■□□□□ 0.89
FAM228B-208ENST00000613899 GABRA3P34903 492 aa20.59■□□□□ 0.89
FAM228B-208ENST00000613899 FRKP42685 505 aaPredicted RBP20.59■□□□□ 0.89
FAM228B-208ENST00000613899 RFX3P48380 749 aa20.59■□□□□ 0.89
FAM228B-208ENST00000613899 STARP49675 285 aa20.59■□□□□ 0.89
FAM228B-208ENST00000613899 MANFP55145 182 aaKnown RBP20.59■□□□□ 0.89
FAM228B-208ENST00000613899 SORDQ00796 357 aa20.59■□□□□ 0.89
FAM228B-208ENST00000613899 STX5Q13190 355 aa20.59■□□□□ 0.89
FAM228B-208ENST00000613899 BCL2A1Q16548 175 aa20.59■□□□□ 0.89
FAM228B-208ENST00000613899 ZNF385BQ569K4 471 aa20.59■□□□□ 0.89
FAM228B-208ENST00000613899 R3HCC1LQ7Z5L2 792 aaKnown RBP20.59■□□□□ 0.89
FAM228B-208ENST00000613899 GRAMD2AQ8IUY3 354 aa20.59■□□□□ 0.89
FAM228B-208ENST00000613899 CDRT4Q8N9R6 151 aa20.59■□□□□ 0.89
FAM228B-208ENST00000613899 OR2M3Q8NG83 312 aa20.59■□□□□ 0.89
FAM228B-208ENST00000613899 CLHC1Q8NHS4 586 aa20.59■□□□□ 0.89
FAM228B-208ENST00000613899 PPP3R2Q96LZ3 170 aa20.59■□□□□ 0.89
FAM228B-208ENST00000613899 G6PC3Q9BUM1 346 aa20.59■□□□□ 0.89
FAM228B-208ENST00000613899 TBL1XR1Q9BZK7 514 aa20.59■□□□□ 0.89
FAM228B-208ENST00000613899 DNAJB12Q9NXW2 375 aaKnown RBP20.59■□□□□ 0.89
FAM228B-208ENST00000613899 CELSR1Q9NYQ6 3014 aa20.59■□□□□ 0.89
FAM228B-208ENST00000613899 C17orf51A8MQB3 221 aa20.58■□□□□ 0.89
FAM228B-208ENST00000613899 PEPDP12955 493 aa20.58■□□□□ 0.89
FAM228B-208ENST00000613899 HPCAL1P37235 193 aa20.58■□□□□ 0.89
FAM228B-208ENST00000613899 AGFG1P52594 562 aaKnown RBP20.58■□□□□ 0.89
FAM228B-208ENST00000613899 TESK1Q15569 626 aa20.58■□□□□ 0.89
FAM228B-208ENST00000613899 UGT3A2Q3SY77 523 aa20.58■□□□□ 0.89
FAM228B-208ENST00000613899 RAET1LQ5VY80 246 aa20.58■□□□□ 0.89
FAM228B-208ENST00000613899 WDR93Q6P2C0 686 aa20.58■□□□□ 0.89
FAM228B-208ENST00000613899 LRIG3Q6UXM1 1119 aa20.58■□□□□ 0.89
FAM228B-208ENST00000613899 SZRD1Q7Z422 152 aa20.58■□□□□ 0.89
FAM228B-208ENST00000613899 GPR151Q8TDV0 419 aa20.58■□□□□ 0.89
FAM228B-208ENST00000613899 HOXB13Q92826 284 aaPredicted RBP20.58■□□□□ 0.89
FAM228B-208ENST00000613899 CAVIN3Q969G5 261 aa20.58■□□□□ 0.89
FAM228B-208ENST00000613899 RMND5BQ96G75 393 aaPredicted RBP20.58■□□□□ 0.89
FAM228B-208ENST00000613899 MS4A4EQ96PG1 132 aa20.58■□□□□ 0.89
FAM228B-208ENST00000613899 POLDIP3Q9BY77 421 aaKnown RBP20.58■□□□□ 0.89
FAM228B-208ENST00000613899 HHATLQ9HCP6 504 aa20.58■□□□□ 0.89
FAM228B-208ENST00000613899 FLRT3Q9NZU0 649 aa20.58■□□□□ 0.89
FAM228B-208ENST00000613899 JKAMPQ9P055 326 aa20.58■□□□□ 0.89
FAM228B-208ENST00000613899 NTMQ9P121 344 aa20.58■□□□□ 0.89
FAM228B-208ENST00000613899 BAIAP2L1Q9UHR4 511 aa20.58■□□□□ 0.89
FAM228B-208ENST00000613899 MED12LQ86YW9 2145 aa20.57■□□□□ 0.88
FAM228B-208ENST00000613899 LINC01387J3KSC0 135 aa20.57■□□□□ 0.88
FAM228B-208ENST00000613899 HCRTR2O43614 444 aa20.57■□□□□ 0.88
FAM228B-208ENST00000613899 NKX2-2O95096 273 aa20.57■□□□□ 0.88
FAM228B-208ENST00000613899 UTS2O95399 124 aa20.57■□□□□ 0.88
FAM228B-208ENST00000613899 BCKDHAP12694 445 aa20.57■□□□□ 0.88
FAM228B-208ENST00000613899 HK1P19367 917 aa20.57■□□□□ 0.88
FAM228B-208ENST00000613899 RPL3P39023 403 aaKnown RBP20.57■□□□□ 0.88
FAM228B-208ENST00000613899 PRKAG1P54619 331 aa20.57■□□□□ 0.88
FAM228B-208ENST00000613899 B3GALT5-AS1P59052 145 aa20.57■□□□□ 0.88
FAM228B-208ENST00000613899 EEF1A1P68104 462 aaKnown RBP20.57■□□□□ 0.88
FAM228B-208ENST00000613899 XKR7Q5GH72 579 aa20.57■□□□□ 0.88
FAM228B-208ENST00000613899 EEF1A1P5Q5VTE0 462 aa20.57■□□□□ 0.88
FAM228B-208ENST00000613899 SPNS3Q6ZMD2 512 aa20.57■□□□□ 0.88
FAM228B-208ENST00000613899 ZCCHC23Q6ZST2 131 aa20.57■□□□□ 0.88
FAM228B-208ENST00000613899 CHMP1BQ7LBR1 199 aa20.57■□□□□ 0.88
FAM228B-208ENST00000613899 NUP43Q8NFH3 380 aa20.57■□□□□ 0.88
FAM228B-208ENST00000613899 GOT1L1Q8NHS2 421 aaPredicted RBP20.57■□□□□ 0.88
FAM228B-208ENST00000613899 AGR3Q8TD06 166 aa20.57■□□□□ 0.88
FAM228B-208ENST00000613899 GPATCH1Q9BRR8 931 aaKnown RBP20.57■□□□□ 0.88
FAM228B-208ENST00000613899 MED11Q9P086 117 aa20.57■□□□□ 0.88
FAM228B-208ENST00000613899 GXYLT2A0PJZ3 443 aa20.56■□□□□ 0.88
FAM228B-208ENST00000613899 TUBAL3A6NHL2 446 aa20.56■□□□□ 0.88
FAM228B-208ENST00000613899 A6NNC1 897 aa20.56■□□□□ 0.88
FAM228B-208ENST00000613899 MAP3K8P41279 467 aa20.56■□□□□ 0.88
FAM228B-208ENST00000613899 PRR5P85299 388 aa20.56■□□□□ 0.88
FAM228B-208ENST00000613899 FOXF2Q12947 444 aa20.56■□□□□ 0.88
FAM228B-208ENST00000613899 MARCH3Q86UD3 253 aa20.56■□□□□ 0.88
FAM228B-208ENST00000613899 MEIOBQ8N635 442 aa20.56■□□□□ 0.88
FAM228B-208ENST00000613899 PIK3R3Q92569 461 aa20.56■□□□□ 0.88
FAM228B-208ENST00000613899 SLC9A6Q92581 669 aa20.56■□□□□ 0.88
FAM228B-208ENST00000613899 INTS12Q96CB8 462 aaKnown RBP20.56■□□□□ 0.88
FAM228B-208ENST00000613899 C1GALT1C1Q96EU7 318 aa20.56■□□□□ 0.88
FAM228B-208ENST00000613899 PIGQQ9BRB3 760 aa20.56■□□□□ 0.88
FAM228B-208ENST00000613899 CLEC4MQ9H2X3 399 aaPredicted RBP20.56■□□□□ 0.88
FAM228B-208ENST00000613899 PIGMQ9H3S5 423 aa20.56■□□□□ 0.88
FAM228B-208ENST00000613899 RASSF1Q9NS23 344 aa20.56■□□□□ 0.88
FAM228B-208ENST00000613899 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.55■□□□□ 0.88
FAM228B-208ENST00000613899 FAM221AA4D161 298 aa20.55■□□□□ 0.88
FAM228B-208ENST00000613899 SCAMP2O15127 329 aaKnown RBP20.55■□□□□ 0.88
FAM228B-208ENST00000613899 EMC8O43402 210 aa20.55■□□□□ 0.88
FAM228B-208ENST00000613899 ANGPTL1O95841 491 aa20.55■□□□□ 0.88
FAM228B-208ENST00000613899 DNAJA1P31689 397 aaKnown RBP20.55■□□□□ 0.88
FAM228B-208ENST00000613899 CPA2P48052 419 aa20.55■□□□□ 0.88
FAM228B-208ENST00000613899 EEFSECP57772 596 aaKnown RBP20.55■□□□□ 0.88
FAM228B-208ENST00000613899 C17orf67Q0P5P2 114 aa20.55■□□□□ 0.88
FAM228B-208ENST00000613899 MLC1Q15049 377 aa20.55■□□□□ 0.88
FAM228B-208ENST00000613899 ATP6AP1LQ52LC2 224 aa20.55■□□□□ 0.88
FAM228B-208ENST00000613899 ZCCHC12Q6PEW1 402 aa20.55■□□□□ 0.88
FAM228B-208ENST00000613899 P4HA3Q7Z4N8 544 aa20.55■□□□□ 0.88
FAM228B-208ENST00000613899 UBQLNLQ8IYU4 475 aa20.55■□□□□ 0.88
FAM228B-208ENST00000613899 GCNT2Q8N0V5 402 aa20.55■□□□□ 0.88
FAM228B-208ENST00000613899 DUSP19Q8WTR2 217 aa20.55■□□□□ 0.88
FAM228B-208ENST00000613899 GIMAP5Q96F15 307 aa20.55■□□□□ 0.88
FAM228B-208ENST00000613899 TMEM109Q9BVC6 243 aa20.55■□□□□ 0.88
FAM228B-208ENST00000613899 RBM24Q9BX46 236 aaKnown RBP20.55■□□□□ 0.88
FAM228B-208ENST00000613899 RTN4RQ9BZR6 473 aa20.55■□□□□ 0.88
FAM228B-208ENST00000613899 ATP6V1HQ9UI12 483 aa20.55■□□□□ 0.88
FAM228B-208ENST00000613899 IGLV3-32A0A0A0MS00 114 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms