RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 TUBGCP3Q96CW5 907 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 RBM18Q96H35 190 aaKnown RBP4.6□□□□□ -1.67
SYCP1-209ENST00000613524 CDRT15Q96T59 188 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 ERVK-6Q9BXR3 956 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 MRPS26Q9BYN8 205 aaKnown RBP4.6□□□□□ -1.67
SYCP1-209ENST00000613524 DEFB126Q9BYW3 111 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 NUF2Q9BZD4 464 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 PRORYQ9H606 182 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 RPF2Q9H7B2 306 aaKnown RBP4.6□□□□□ -1.67
SYCP1-209ENST00000613524 ZNF225Q9UK10 706 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 ERVK-19Q9WJR5 959 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 EML6Q6ZMW3 1958 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 URADA6NGE7 173 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 FAM166BA8MTA8 275 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 CLDN4O14493 209 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 STX16O14662 325 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 CFLARO15519 480 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 BCAS2O75934 225 aaPredicted RBP4.6□□□□□ -1.67
SYCP1-209ENST00000613524 CLPTM1O96005 669 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 OTCP00480 354 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 OPN1LWP04000 364 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 ZNF26P17031 533 aaPredicted RBP4.6□□□□□ -1.67
SYCP1-209ENST00000613524 MMP11P24347 488 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 EPHA3P29320 983 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 RANBP1P43487 201 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 CCR9P51686 369 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 LIM2P55344 173 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 PKNOX1P55347 436 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 SOX8P57073 446 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 LRRC23Q53EV4 343 aaPredicted RBP4.6□□□□□ -1.67
SYCP1-209ENST00000613524 ABHD17BQ5VST6 288 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 TMEM198Q66K66 360 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 ATG9BQ674R7 924 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 BICRALQ6AI39 1079 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 TCTN3Q6NUS6 607 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 FAM111BQ6SJ93 734 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 PLXDC2Q6UX71 529 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 C16orf89Q6UX73 402 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 ZYG11AQ6WRX3 759 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 OLIG3Q7RTU3 272 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 LRRC70Q7Z2Q7 622 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 COMMD6Q7Z4G1 85 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 CUZD1Q86UP6 607 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 ANKRD46Q86W74 232 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 BEST3Q8N1M1 668 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 ZNF843Q8N446 348 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 BHLHE22Q8NFJ8 381 aaPredicted RBP4.6□□□□□ -1.67
SYCP1-209ENST00000613524 RP9Q8TA86 221 aaKnown RBP4.6□□□□□ -1.67
SYCP1-209ENST00000613524 SLC9A6Q92581 669 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 NCLNQ969V3 563 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 RCN3Q96D15 328 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 LMF1Q96S06 567 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 GPATCH1Q9BRR8 931 aaKnown RBP4.6□□□□□ -1.67
SYCP1-209ENST00000613524 EFCAB11Q9BUY7 163 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 ASF1BQ9NVP2 202 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 ZDHHC2Q9UIJ5 367 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 CDC42EP3Q9UKI2 254 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 HSF4Q9ULV5 492 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 DLGAP4Q9Y2H0 992 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 COL27A1Q8IZC6 1860 aaPredicted RBP4.6□□□□□ -1.67
SYCP1-209ENST00000613524 TLN2Q9Y4G6 2542 aa4.6□□□□□ -1.67
SYCP1-209ENST00000613524 C21orf140B9A014 251 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 SLC22A2O15244 555 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 HDAC3O15379 428 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 PCDH7O60245 1069 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 OR2J2O76002 312 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 ZNF205O95201 554 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 WDPCPO95876 746 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 TBX6O95947 436 aaPredicted RBP4.59□□□□□ -1.67
SYCP1-209ENST00000613524 IL3P08700 152 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 ANXA4P09525 319 aaPredicted RBP4.59□□□□□ -1.67
SYCP1-209ENST00000613524 FAM58BPP0C7Q3 252 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 ERGP11308 486 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 DDX5P17844 614 aaKnown RBP4.59□□□□□ -1.67
SYCP1-209ENST00000613524 HIST1H1TP22492 207 aaPredicted RBP4.59□□□□□ -1.67
SYCP1-209ENST00000613524 ATP5A1P25705 553 aaKnown RBP4.59□□□□□ -1.67
SYCP1-209ENST00000613524 SOAT1P35610 550 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 SLC16A1P53985 500 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 HPCAP84074 193 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 CD69Q07108 199 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 C2orf80Q0P641 193 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 TRAF3Q13114 568 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 FLOT2Q14254 428 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 PTGR1Q14914 329 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 PLEKHN1Q494U1 663 aaPredicted RBP4.59□□□□□ -1.67
SYCP1-209ENST00000613524 FLYWCH1Q4VC44 716 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 NDUFAF5Q5TEU4 345 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 AGAP7PQ5VUJ5 663 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 OR4C11Q6IEV9 310 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 ZFP1Q6P2D0 407 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 ESPNLQ6ZVH7 1005 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 GALNTL5Q7Z4T8 443 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 CPEB2Q7Z5Q1 589 aaKnown RBP4.59□□□□□ -1.67
SYCP1-209ENST00000613524 PGAM4Q8N0Y7 254 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 CA13Q8N1Q1 262 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 SLC15A4Q8N697 577 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 RNF148Q8N7C7 305 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 GATSQ8NAP1 163 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 ABHD11Q8NFV4 315 aa4.59□□□□□ -1.67
SYCP1-209ENST00000613524 OR2L5Q8NG80 312 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms