RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 HDXQ7Z353 690 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 GDF7Q7Z4P5 450 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 SPATA19Q7Z5L4 167 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 MISPQ8IVT2 679 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 ULK2Q8IYT8 1036 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 LILRB4Q8NHJ6 448 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 GOT1L1Q8NHS2 421 aaPredicted RBP11.24□□□□□ -0.61
CBWD3-208ENST00000612050 SFXN5Q8TD22 340 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 COQ8BQ96D53 544 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 STACQ99469 402 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 TIMP4Q99727 224 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 ACTRT3Q9BYD9 372 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 OR2B2Q9GZK3 357 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 ACBD3Q9H3P7 528 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 NTMQ9P121 344 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 HAO1Q9UJM8 370 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 SLC6A5Q9Y345 797 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 MRPS18CQ9Y3D5 142 aaKnown RBP11.24□□□□□ -0.61
CBWD3-208ENST00000612050 USP9XQ93008 2570 aaPredicted RBP11.24□□□□□ -0.61
CBWD3-208ENST00000612050 NCOA6Q14686 2063 aaPredicted RBP11.23□□□□□ -0.61
CBWD3-208ENST00000612050 NCKAP5O14513 1909 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 HECTD1Q9ULT8 2610 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 HDAC3O15379 428 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 NDUFB5O43674 189 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 NME6O75414 186 aaPredicted RBP11.23□□□□□ -0.61
CBWD3-208ENST00000612050 UTS2O95399 124 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 C6orf47O95873 294 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 AGR2O95994 175 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 HMGN2P05204 90 aaKnown RBP11.23□□□□□ -0.61
CBWD3-208ENST00000612050 GLI4P10075 376 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 BMP7P18075 431 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 ENDOUP21128 410 aaKnown RBP11.23□□□□□ -0.61
CBWD3-208ENST00000612050 PEX19P40855 299 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 PTGDSP41222 190 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 KIR3DL1P43629 444 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 ANXA11P50995 505 aaKnown RBP11.23□□□□□ -0.61
CBWD3-208ENST00000612050 C21orf58P58505 322 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 LRRC74AQ0VAA2 488 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 LASP1Q14847 261 aaKnown RBP11.23□□□□□ -0.61
CBWD3-208ENST00000612050 SLC25A35Q3KQZ1 300 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 FNDC7Q5VTL7 733 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 RAET1LQ5VY80 246 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 NXNQ6DKJ4 435 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 DESI1Q6ICB0 168 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 OR5M10Q6IEU7 315 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 CDC73Q6P1J9 531 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 NCCRP1Q6ZVX7 275 aaPredicted RBP11.23□□□□□ -0.61
CBWD3-208ENST00000612050 WDR53Q7Z5U6 358 aaPredicted RBP11.23□□□□□ -0.61
CBWD3-208ENST00000612050 CAMKMTQ7Z624 323 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 PIK3R3Q92569 461 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 FAM120BQ96EK7 910 aaKnown RBP11.23□□□□□ -0.61
CBWD3-208ENST00000612050 TRIB1Q96RU8 372 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 SORT1Q99523 831 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 BTBD2Q9BX70 525 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 UGT2B28Q9BY64 529 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 PRDM14Q9GZV8 571 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 HOXD1Q9GZZ0 328 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 PIGUQ9H490 435 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 MEAF6Q9HAF1 191 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 UBQLN4Q9NRR5 601 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 DUSP22Q9NRW4 184 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 GIN1Q9NXP7 522 aa11.23□□□□□ -0.61
CBWD3-208ENST00000612050 DOPEY1Q5JWR5 2465 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 RNASET2O00584 256 aaKnown RBP11.22□□□□□ -0.61
CBWD3-208ENST00000612050 ANGPTL1O95841 491 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 EPPINO95925 133 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 AK1P00568 194 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 KITP10721 976 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 PEPDP12955 493 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 HK1P19367 917 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 EFNA1P20827 205 aaPredicted RBP11.22□□□□□ -0.61
CBWD3-208ENST00000612050 CHMP24386 653 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 S100A3P33764 101 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 DIO3P55073 304 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 MPP2Q14168 576 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.22□□□□□ -0.61
CBWD3-208ENST00000612050 WDR75Q8IWA0 830 aaKnown RBP11.22□□□□□ -0.61
CBWD3-208ENST00000612050 MEIOBQ8N635 442 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 KRTCAP2Q8N6L1 136 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 TRIML2Q8N7C3 387 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 WDSUB1Q8N9V3 476 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 SLC16A11Q8NCK7 471 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 OR4A15Q8NGL6 344 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 FBXO30Q8TB52 745 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 LRRC8CQ8TDW0 803 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 TLCD1Q96CP7 247 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 PIGQQ9BRB3 760 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 YIPF4Q9BSR8 244 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 DSN1Q9H410 356 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 ZNF395Q9H8N7 513 aaPredicted RBP11.22□□□□□ -0.61
CBWD3-208ENST00000612050 CALHM2Q9HA72 323 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 EXD2Q9NVH0 621 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 PNPOQ9NVS9 261 aa11.22□□□□□ -0.61
CBWD3-208ENST00000612050 USP9YO00507 2555 aaPredicted RBP11.22□□□□□ -0.61
CBWD3-208ENST00000612050 ARHGAP21Q5T5U3 1957 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 COL12A1Q99715 3063 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 UQCRHLA0A096LP55 91 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 GXYLT2A0PJZ3 443 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 FADS1O60427 444 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 NGFRP08138 427 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms