RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 KDELR2P33947 212 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 PEX19P40855 299 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 C2orf80Q0P641 193 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 KLRB1Q12918 225 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 EPS8Q12929 822 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 MEP1AQ16819 746 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 OTUD3Q5T2D3 398 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-217ENST00000611848 ABHD17BQ5VST6 288 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 FAM71E1Q6IPT2 247 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 ANKRD26P1Q6NSI1 321 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 STK32CQ86UX6 486 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 ZNF786Q8N393 782 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 ZADH2Q8N4Q0 377 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 SLC5A8Q8N695 610 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 TRIML2Q8N7C3 387 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 APCDD1LQ8NCL9 501 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 OR1N1Q8NGS0 311 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 OR5K1Q8NHB7 308 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 ZFP90Q8TF47 636 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 RIT1Q92963 219 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 MTERF3Q96E29 417 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 RBM4BQ9BQ04 359 aaKnown RBP8.18□□□□□ -1.1
SMAD4-217ENST00000611848 RBM4Q9BWF3 364 aaKnown RBP8.18□□□□□ -1.1
SMAD4-217ENST00000611848 DEFB126Q9BYW3 111 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 TPT1P8Q9HAU6 139 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 GIMAP4Q9NUV9 329 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 CORO2BQ9UQ03 480 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 CEPT1Q9Y6K0 416 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 ZNF780BQ9Y6R6 833 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 NBASA2RRP1 2371 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 ERAL1O75616 437 aaKnown RBP8.18□□□□□ -1.1
SMAD4-217ENST00000611848 ZFAND5O76080 213 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 DDAH2O95865 285 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 NUDT7P0C024 238 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 RPL3P39023 403 aaKnown RBP8.18□□□□□ -1.1
SMAD4-217ENST00000611848 DCTP40126 519 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 NFATC3Q12968 1075 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 LSAMPQ13449 338 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 ZNF385BQ569K4 471 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 B3GNTL1Q67FW5 361 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-217ENST00000611848 LINC00696Q6ZRV3 163 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 CBLL1Q75N03 491 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 EIF3MQ7L2H7 374 aaKnown RBP8.18□□□□□ -1.1
SMAD4-217ENST00000611848 R3HCC1LQ7Z5L2 792 aaKnown RBP8.18□□□□□ -1.1
SMAD4-217ENST00000611848 RPS19BP1Q86WX3 136 aaKnown RBP8.18□□□□□ -1.1
SMAD4-217ENST00000611848 MMP21Q8N119 569 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 CLEC4FQ8N1N0 589 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 AMER2Q8N7J2 671 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 OR8K3Q8NH51 312 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 CDC26Q8NHZ8 85 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 SLC2A12Q8TD20 617 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 ZNF721Q8TF20 911 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 HAS2Q92819 552 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 SDCCAG3Q96C92 435 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 SENP5Q96HI0 755 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-217ENST00000611848 MBOAT4Q96T53 435 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 OR8D2Q9GZM6 311 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 RNF32Q9H0A6 362 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 GABARAPL1Q9H0R8 117 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 IL1RAPQ9NPH3 570 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 SLC35C2Q9NQQ7 365 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 ATAD3AQ9NVI7 634 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 TAS2R7Q9NYW3 318 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 STMN3Q9NZ72 180 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 PTTG2Q9NZH5 202 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 ABI3Q9P2A4 366 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 COPS7AQ9UBW8 275 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 RPS6KA6Q9UK32 745 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 VPS4AQ9UN37 437 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 ENTPD4Q9Y227 616 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 MAGED1Q9Y5V3 778 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-217ENST00000611848 BOD1L1Q8NFC6 3051 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 TRBV11-1A0A0K0K1C0 115 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 ENO4A6NNW6 628 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 H3BSA7 217 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 GNGT2O14610 69 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 CLIC3O95833 236 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 PRB1P04280 392 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 IGKV3-11P04433 115 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 ATP1B1P05026 303 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 DDX5P17844 614 aaKnown RBP8.17□□□□□ -1.1
SMAD4-217ENST00000611848 CDH2P19022 906 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-217ENST00000611848 FEN1P39748 380 aaKnown RBP8.17□□□□□ -1.1
SMAD4-217ENST00000611848 MVDP53602 400 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 IST1P53990 364 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 CDH15P55291 814 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 SH3BGRP55822 239 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-217ENST00000611848 ARG2P78540 354 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 ROR2Q01974 943 aaKnown RBP8.17□□□□□ -1.1
SMAD4-217ENST00000611848 GAB1Q13480 694 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 ZNF267Q14586 743 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-217ENST00000611848 RGNQ15493 299 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 CEBPEQ15744 281 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 ACER2Q5QJU3 275 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 TTC23Q5W5X9 447 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 SHQ1Q6PI26 577 aaKnown RBP8.17□□□□□ -1.1
SMAD4-217ENST00000611848 HSDL2Q6YN16 418 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 DGAT2L6Q6ZPD8 337 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 PIWIL3Q7Z3Z3 882 aaKnown RBP8.17□□□□□ -1.1
SMAD4-217ENST00000611848 TMEM179BQ7Z7N9 219 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms