RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 ACSM2AQ08AH3 577 aa19.9■□□□□ 0.78
CBWD3-207ENST00000611426 MMEL1Q495T6 779 aa19.9■□□□□ 0.78
CBWD3-207ENST00000611426 ACSM2BQ68CK6 577 aa19.9■□□□□ 0.78
CBWD3-207ENST00000611426 LIX1LQ8IVB5 337 aa19.9■□□□□ 0.78
CBWD3-207ENST00000611426 SPPL2AQ8TCT8 520 aa19.9■□□□□ 0.78
CBWD3-207ENST00000611426 ZBTB18Q99592 522 aa19.9■□□□□ 0.78
CBWD3-207ENST00000611426 ZNF559Q9BR84 538 aa19.9■□□□□ 0.78
CBWD3-207ENST00000611426 GPATCH1Q9BRR8 931 aaKnown RBP19.9■□□□□ 0.78
CBWD3-207ENST00000611426 THTPAQ9BU02 230 aa19.9■□□□□ 0.78
CBWD3-207ENST00000611426 RASSF4Q9H2L5 321 aa19.9■□□□□ 0.78
CBWD3-207ENST00000611426 LEF1Q9UJU2 399 aaPredicted RBP19.9■□□□□ 0.78
CBWD3-207ENST00000611426 PCDHGB3Q9Y5G1 929 aa19.9■□□□□ 0.78
CBWD3-207ENST00000611426 F8P00451 2351 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 CFLARO15519 480 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 ERAL1O75616 437 aaKnown RBP19.89■□□□□ 0.77
CBWD3-207ENST00000611426 TRAPPC6AO75865 159 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 SNX4O95219 450 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 RPP38P78345 283 aaKnown RBP19.89■□□□□ 0.77
CBWD3-207ENST00000611426 PTGR1Q14914 329 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 SPATS1Q496A3 300 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 VPS26BQ4G0F5 336 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 BICRALQ6AI39 1079 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 SLC48A1Q6P1K1 146 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 MSANTD1Q6ZTZ1 278 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 PACS2Q86VP3 889 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 RIMKLAQ8IXN7 391 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 PRR22Q8IZ63 422 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 SECISBP2Q96T21 854 aaKnown RBP19.89■□□□□ 0.77
CBWD3-207ENST00000611426 ANGPTL4Q9BY76 406 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 DPY30Q9C005 99 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 SLC24A3Q9HC58 644 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 KCNN3Q9UGI6 736 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 CES1P1Q9UKY3 287 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 PSME2Q9UL46 239 aa19.89■□□□□ 0.77
CBWD3-207ENST00000611426 C15orf38-AP3S2A0A0A6YYH1 394 aa19.88■□□□□ 0.77
CBWD3-207ENST00000611426 CCDC154A6NI56 674 aa19.88■□□□□ 0.77
CBWD3-207ENST00000611426 FXYD1O00168 92 aa19.88■□□□□ 0.77
CBWD3-207ENST00000611426 IL6P05231 212 aa19.88■□□□□ 0.77
CBWD3-207ENST00000611426 S1PR1P21453 382 aa19.88■□□□□ 0.77
CBWD3-207ENST00000611426 FEN1P39748 380 aaKnown RBP19.88■□□□□ 0.77
CBWD3-207ENST00000611426 ASMTP46597 345 aa19.88■□□□□ 0.77
CBWD3-207ENST00000611426 MASP1P48740 699 aa19.88■□□□□ 0.77
CBWD3-207ENST00000611426 NME5P56597 212 aa19.88■□□□□ 0.77
CBWD3-207ENST00000611426 DUSP8Q13202 625 aa19.88■□□□□ 0.77
CBWD3-207ENST00000611426 DPY19L1Q2PZI1 675 aa19.88■□□□□ 0.77
CBWD3-207ENST00000611426 TRMT5Q32P41 509 aaKnown RBP19.88■□□□□ 0.77
CBWD3-207ENST00000611426 RIPPLY2Q5TAB7 128 aa19.88■□□□□ 0.77
CBWD3-207ENST00000611426 WDR53Q7Z5U6 358 aaPredicted RBP19.88■□□□□ 0.77
CBWD3-207ENST00000611426 NET1Q7Z628 596 aaPredicted RBP19.88■□□□□ 0.77
CBWD3-207ENST00000611426 VWA5B2Q8N398 1253 aa19.88■□□□□ 0.77
CBWD3-207ENST00000611426 C17orf47Q8NEP4 570 aa19.88■□□□□ 0.77
CBWD3-207ENST00000611426 TM4SF18Q96CE8 201 aa19.88■□□□□ 0.77
CBWD3-207ENST00000611426 HOPXQ9BPY8 73 aaPredicted RBP19.88■□□□□ 0.77
CBWD3-207ENST00000611426 GID8Q9NWU2 228 aa19.88■□□□□ 0.77
CBWD3-207ENST00000611426 SLC7A8Q9UHI5 535 aa19.88■□□□□ 0.77
CBWD3-207ENST00000611426 BCAP29Q9UHQ4 241 aa19.88■□□□□ 0.77
CBWD3-207ENST00000611426 CFL2Q9Y281 166 aa19.88■□□□□ 0.77
CBWD3-207ENST00000611426 CSNK2A2P19784 350 aaPredicted RBP19.87■□□□□ 0.77
CBWD3-207ENST00000611426 PRPS1L1P21108 318 aa19.87■□□□□ 0.77
CBWD3-207ENST00000611426 ABCD3P28288 659 aa19.87■□□□□ 0.77
CBWD3-207ENST00000611426 TIA1P31483 386 aaKnown RBP eCLIP19.87■□□□□ 0.77
CBWD3-207ENST00000611426 CASP3P42574 277 aa19.87■□□□□ 0.77
CBWD3-207ENST00000611426 RAE1P78406 368 aaKnown RBP19.87■□□□□ 0.77
CBWD3-207ENST00000611426 MAP4K2Q12851 820 aa19.87■□□□□ 0.77
CBWD3-207ENST00000611426 MYBPHQ13203 477 aa19.87■□□□□ 0.77
CBWD3-207ENST00000611426 PRICKLE4Q2TBC4 344 aa19.87■□□□□ 0.77
CBWD3-207ENST00000611426 SLC25A35Q3KQZ1 300 aa19.87■□□□□ 0.77
CBWD3-207ENST00000611426 FAM111BQ6SJ93 734 aa19.87■□□□□ 0.77
CBWD3-207ENST00000611426 MMP21Q8N119 569 aa19.87■□□□□ 0.77
CBWD3-207ENST00000611426 GNRHR2Q96P88 292 aa19.87■□□□□ 0.77
CBWD3-207ENST00000611426 NXF5Q9H1B4 397 aaKnown RBP19.87■□□□□ 0.77
CBWD3-207ENST00000611426 DENND2DQ9H6A0 471 aaPredicted RBP19.87■□□□□ 0.77
CBWD3-207ENST00000611426 WBP11Q9Y2W2 641 aaKnown RBP19.87■□□□□ 0.77
CBWD3-207ENST00000611426 ARHGAP21Q5T5U3 1957 aa19.87■□□□□ 0.77
CBWD3-207ENST00000611426 HIVEP1P15822 2718 aa19.87■□□□□ 0.77
CBWD3-207ENST00000611426 AHRRA9YTQ3 701 aa19.86■□□□□ 0.77
CBWD3-207ENST00000611426 ATP1B1P05026 303 aa19.86■□□□□ 0.77
CBWD3-207ENST00000611426 TACR1P25103 407 aa19.86■□□□□ 0.77
CBWD3-207ENST00000611426 ALDH9A1P49189 494 aa19.86■□□□□ 0.77
CBWD3-207ENST00000611426 PSME3P61289 254 aa19.86■□□□□ 0.77
CBWD3-207ENST00000611426 MGAT2Q10469 447 aa19.86■□□□□ 0.77
CBWD3-207ENST00000611426 TOMM20Q15388 145 aa19.86■□□□□ 0.77
CBWD3-207ENST00000611426 CAMKMTQ7Z624 323 aa19.86■□□□□ 0.77
CBWD3-207ENST00000611426 C1orf52Q8N6N3 182 aaKnown RBP19.86■□□□□ 0.77
CBWD3-207ENST00000611426 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.86■□□□□ 0.77
CBWD3-207ENST00000611426 FAIM2Q9BWQ8 316 aa19.86■□□□□ 0.77
CBWD3-207ENST00000611426 ABCD2Q9UBJ2 740 aa19.86■□□□□ 0.77
CBWD3-207ENST00000611426 DTX4Q9Y2E6 619 aa19.86■□□□□ 0.77
CBWD3-207ENST00000611426 ZNF780BQ9Y6R6 833 aa19.86■□□□□ 0.77
CBWD3-207ENST00000611426 SPG11Q96JI7 2443 aa19.86■□□□□ 0.77
CBWD3-207ENST00000611426 HSPB2A8KAH6 182 aa19.85■□□□□ 0.77
CBWD3-207ENST00000611426 HPNP05981 417 aa19.85■□□□□ 0.77
CBWD3-207ENST00000611426 ABCB1P08183 1280 aaPredicted RBP19.85■□□□□ 0.77
CBWD3-207ENST00000611426 NAGAP17050 411 aa19.85■□□□□ 0.77
CBWD3-207ENST00000611426 CDK9P50750 372 aaKnown RBP19.85■□□□□ 0.77
CBWD3-207ENST00000611426 EXOSC7Q15024 291 aaKnown RBP19.85■□□□□ 0.77
CBWD3-207ENST00000611426 HSPB2Q16082 182 aa19.85■□□□□ 0.77
CBWD3-207ENST00000611426 NNATQ16517 81 aa19.85■□□□□ 0.77
CBWD3-207ENST00000611426 TIGD2Q4W5G0 525 aa19.85■□□□□ 0.77
CBWD3-207ENST00000611426 TMEM200AQ86VY9 491 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms