RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 NCF4Q15080 339 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 ELOCQ15369 112 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 EIPR1Q53HC9 387 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 USP43Q70EL4 1123 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 TUBA1AQ71U36 451 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 MCATQ8IVS2 390 aaKnown RBP12.69□□□□□ -0.38
NEK3-205ENST00000610828 NRMQ8IXM6 262 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 LMX1AQ8TE12 382 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 TMEM255BQ8WV15 326 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 ANKRD9Q96BM1 317 aaPredicted RBP12.69□□□□□ -0.38
NEK3-205ENST00000610828 WDR12Q9GZL7 423 aaKnown RBP12.69□□□□□ -0.38
NEK3-205ENST00000610828 SAP130Q9H0E3 1048 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 SLC7A7Q9UM01 511 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 SPEGQ15772 3267 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 A0A0A6YYC8 382 aaPredicted RBP12.68□□□□□ -0.38
NEK3-205ENST00000610828 I3L1I5 382 aaPredicted RBP12.68□□□□□ -0.38
NEK3-205ENST00000610828 CCRL2O00421 344 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 PEX12O00623 359 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 CHST10O43529 356 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 OR5F1O95221 314 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 CSF2P04141 144 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 THBS1P07996 1170 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 GKN3PP0CG01 181 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 CD38P28907 300 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 GPR4P46093 362 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 RFX3P48380 749 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 MGAT2Q10469 447 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 SRSF5Q13243 272 aaKnown RBP12.68□□□□□ -0.38
NEK3-205ENST00000610828 DECR1Q16698 335 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 LINC00299Q6ZSB3 139 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 LSRQ86X29 649 aaPredicted RBP12.68□□□□□ -0.38
NEK3-205ENST00000610828 ARL14Q8N4G2 192 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 OR8D4Q8NGM9 314 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 OR6Q1Q8NGQ2 317 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 FAM174AQ8TBP5 190 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 S100ZQ8WXG8 99 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 STACQ99469 402 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 MAP3K3Q99759 626 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 CENPOQ9BU64 300 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 RHBDL2Q9NX52 303 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 SATB2Q9UPW6 733 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 GPR52Q9Y2T5 361 aa12.68□□□□□ -0.38
NEK3-205ENST00000610828 ARHGAP33O14559 1287 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 PIP5K1CO60331 668 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 CDC123O75794 336 aaPredicted RBP12.67□□□□□ -0.38
NEK3-205ENST00000610828 DBIP07108 87 aaKnown RBP12.67□□□□□ -0.38
NEK3-205ENST00000610828 GABRA3P34903 492 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 UGT2B10P36537 528 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 MRPL2Q5T653 305 aaKnown RBP12.67□□□□□ -0.38
NEK3-205ENST00000610828 CHRDL2Q6WN34 429 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 DGAT2L6Q6ZPD8 337 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 RASSF6Q6ZTQ3 369 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 RANBP3LQ86VV4 465 aaPredicted RBP12.67□□□□□ -0.38
NEK3-205ENST00000610828 GALNT12Q8IXK2 581 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 ZNF687Q8N1G0 1237 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 VWA5B2Q8N398 1253 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 MCFD2Q8NI22 146 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 ZNF582Q96NG8 517 aaPredicted RBP12.67□□□□□ -0.38
NEK3-205ENST00000610828 MIR1-1HGQ9H1L0 117 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 FBXO8Q9NRD0 319 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 HCN3Q9P1Z3 774 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 SPTBP11277 2137 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 CSO75390 466 aaKnown RBP12.67□□□□□ -0.38
NEK3-205ENST00000610828 SLC35E2P0CK97 266 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 PRG2P13727 222 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 NME1P15531 152 aaKnown RBP12.67□□□□□ -0.38
NEK3-205ENST00000610828 CD27P26842 260 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 CAPZBP47756 277 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 ZNF136P52737 540 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 RPS3AP61247 264 aaKnown RBP12.67□□□□□ -0.38
NEK3-205ENST00000610828 POU6F2P78424 691 aaPredicted RBP12.67□□□□□ -0.38
NEK3-205ENST00000610828 RHAGQ02094 409 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 ZNF155Q12901 538 aaPredicted RBP12.67□□□□□ -0.38
NEK3-205ENST00000610828 SLC13A2Q13183 592 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 EXOSC6Q5RKV6 272 aaKnown RBP12.67□□□□□ -0.38
NEK3-205ENST00000610828 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.67□□□□□ -0.38
NEK3-205ENST00000610828 ZCCHC12Q6PEW1 402 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 DRAXINQ8NBI3 349 aaPredicted RBP12.67□□□□□ -0.38
NEK3-205ENST00000610828 OR52R1Q8NGF1 315 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 RNF217Q8TC41 542 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 CTHRC1Q96CG8 243 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 SLC38A2Q96QD8 506 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 SLC38A3Q99624 504 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 MND1Q9BWT6 205 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 IRAK4Q9NWZ3 460 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 KCNE5Q9UJ90 142 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 PCDHGA3Q9Y5H0 932 aa12.67□□□□□ -0.38
NEK3-205ENST00000610828 GXYLT2A0PJZ3 443 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 KIAA0513O60268 411 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 CH25HO95992 272 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 NID1P14543 1247 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 GNSP15586 552 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 ZNF12P17014 697 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 FPR3P25089 353 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 SOX3P41225 446 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 FASLGP48023 281 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 EFNB1P98172 346 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 ATP1A4Q13733 1029 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 SPHARQ15513 63 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 INAQ16352 499 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms