RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ASPNQ9BXN1 380 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 ARHGAP39Q9C0H5 1083 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 POLR3FQ9H1D9 316 aaPredicted RBP8.35□□□□□ -1.07
COMMD3-215ENST00000602574 SFXN1Q9H9B4 322 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 ANKRA2Q9H9E1 313 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 POPDC2Q9HBU9 364 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 ABCB9Q9NP78 766 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 DNAJB11Q9UBS4 358 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 OPN4Q9UHM6 478 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 IFITM10A6NMD0 228 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 E9PQ18 207 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 H7BY64 318 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 RFXAPO00287 272 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 SDHDO14521 159 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 UBDO15205 165 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 PRAMEF12O95522 483 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 SLC25A27O95847 323 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 F13BP05160 661 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 EPHX1P07099 455 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 HKR1P10072 659 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 CXCL3P19876 107 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 POU3F2P20265 443 aaPredicted RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 LPOP22079 712 aaPredicted RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 IFNGR2P38484 337 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 PITPNBP48739 271 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 CLK2P49760 499 aaKnown RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 MECP2P51608 486 aaKnown RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 DGKEP52429 567 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 PRKAG1P54619 331 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 FGF8P55075 233 aaPredicted RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 OR2B8PP59922 312 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 RAP2BP61225 183 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 LRRC38Q5VT99 294 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 TMEM244Q5VVB8 128 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 GPAT2Q6NUI2 795 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 CDPF1Q6NVV7 123 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 OAFQ86UD1 273 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 GLCCI1Q86VQ1 547 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 THNSL2Q86YJ6 484 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 APCDD1Q8J025 514 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 MMP21Q8N119 569 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 PLD6Q8N2A8 252 aaKnown RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 Q8N402 240 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 IL31RAQ8NI17 732 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 DNAJB14Q8TBM8 379 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 SMIM12Q96EX1 92 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 PHYHIPLQ96FC7 376 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 SPATA13Q96N96 652 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 ALKBH3Q96Q83 286 aaPredicted RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 ZNF382Q96SR6 550 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 MAGEB5Q9BZ81 275 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 MIOSQ9NXC5 875 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 CLEC5AQ9NY25 188 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 NAGKQ9UJ70 344 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 GNG8Q9UK08 70 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 PCDHA11Q9Y5I1 949 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 ZNF831Q5JPB2 1677 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 RGPD3A6NKT7 1758 aaPredicted RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 RGPD4Q7Z3J3 1758 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 A0A087WUJ7 227 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 A0A0J9YYE9 177 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 ABHD14A-ACY1A0A1B0GW23 586 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 ELOA3DA6NLF2 546 aaPredicted RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 CXorf49A8MYA2 514 aaPredicted RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 NEMP1O14524 444 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 RNF13O43567 381 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 FKTNO75072 461 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 EGFP01133 1207 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 TRBC1P01850 177 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 CSH1P0DML2 217 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 CSH2P0DML3 217 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 HSD3B1P14060 373 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 ETS1P14921 441 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 ERCC2P18074 760 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 GABRB1P18505 474 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 KDELR1P24390 212 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 MPZP25189 248 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 SDC2P34741 201 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 GGT2P36268 569 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 NPBWR1P48145 328 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 AGFG1P52594 562 aaKnown RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 EIF5AP63241 154 aaKnown RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 TLE2Q04725 743 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 TCP10Q12799 353 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 PGM5Q15124 567 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 ATP6V1FQ16864 119 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 NKPD1Q17RQ9 610 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 PYCR3Q53H96 274 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 RABL3Q5HYI8 236 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 TMEM198Q66K66 360 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 ZNF660Q6AZW8 331 aaPredicted RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 PRSS55Q6UWB4 352 aaPredicted RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 UBE3DQ7Z6J8 389 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 PTOV1Q86YD1 416 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 SPICQ8N5J4 248 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 C19orf47Q8N9M1 422 aaKnown RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 OR2M7Q8NG81 312 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 NUBPLQ8TB37 319 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 TFGQ92734 400 aaPredicted RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 HLA-CQ95604 372 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms