RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 MTBPQ96DY7 904 aa15□□□□□ -0.01
USE1-208ENST00000600970 MRRFQ96E11 262 aaKnown RBP15□□□□□ -0.01
USE1-208ENST00000600970 HBEGFQ99075 208 aa15□□□□□ -0.01
USE1-208ENST00000600970 FANCFQ9NPI8 374 aa15□□□□□ -0.01
USE1-208ENST00000600970 GPR52Q9Y2T5 361 aa15□□□□□ -0.01
USE1-208ENST00000600970 ROS1P08922 2347 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 FAM187AA6NFU0 413 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 SHISA8B8ZZ34 492 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 PPP6CO00743 305 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 EIF1AYO14602 144 aaKnown RBP14.99□□□□□ -0.01
USE1-208ENST00000600970 C8BP07358 591 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 IL3P08700 152 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 DANCRP0C864 163 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 TYK2P29597 1187 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 EIF1AXP47813 144 aaKnown RBP14.99□□□□□ -0.01
USE1-208ENST00000600970 TMEM44Q2T9K0 475 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 CHRFAM7AQ494W8 412 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 SH2D4BQ5SQS7 431 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 LGSNQ5TDP6 509 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 DNM1P46Q6ZS02 220 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 MARCH3Q86UD3 253 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 CCDC25Q86WR0 208 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 SAMD14Q8IZD0 417 aaPredicted RBP14.99□□□□□ -0.01
USE1-208ENST00000600970 FBXW5Q969U6 566 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 ZBED6CLQ96FA7 236 aaPredicted RBP14.99□□□□□ -0.01
USE1-208ENST00000600970 VPS11Q9H270 941 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 SLCO5A1Q9H2Y9 848 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 NMRK1Q9NWW6 199 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 VPS29Q9UBQ0 182 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 MCM8Q9UJA3 840 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 TMCO1Q9UM00 188 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 SNX6Q9UNH7 406 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 RNF115Q9Y4L5 304 aa14.99□□□□□ -0.01
USE1-208ENST00000600970 MAGED1Q9Y5V3 778 aaPredicted RBP14.99□□□□□ -0.01
USE1-208ENST00000600970 SONP18583 2426 aaKnown RBP14.98□□□□□ -0.01
USE1-208ENST00000600970 PHF1O43189 567 aaPredicted RBP14.98□□□□□ -0.01
USE1-208ENST00000600970 RAD51CO43502 376 aa14.98□□□□□ -0.01
USE1-208ENST00000600970 F12P00748 615 aaPredicted RBP14.98□□□□□ -0.01
USE1-208ENST00000600970 THBS1P07996 1170 aa14.98□□□□□ -0.01
USE1-208ENST00000600970 RPS17P08708 135 aaKnown RBP14.98□□□□□ -0.01
USE1-208ENST00000600970 TSPAN8P19075 237 aa14.98□□□□□ -0.01
USE1-208ENST00000600970 PSMB1P20618 241 aaKnown RBP14.98□□□□□ -0.01
USE1-208ENST00000600970 SERPINB8P50452 374 aa14.98□□□□□ -0.01
USE1-208ENST00000600970 PLTPP55058 493 aa14.98□□□□□ -0.01
USE1-208ENST00000600970 ZNF155Q12901 538 aaPredicted RBP14.98□□□□□ -0.01
USE1-208ENST00000600970 CYP27C1Q4G0S4 372 aa14.98□□□□□ -0.01
USE1-208ENST00000600970 ALKBH2Q6NS38 261 aa14.98□□□□□ -0.01
USE1-208ENST00000600970 FAM9CQ8IZT9 166 aa14.98□□□□□ -0.01
USE1-208ENST00000600970 NEUROG1Q92886 237 aa14.98□□□□□ -0.01
USE1-208ENST00000600970 GTPBP3Q969Y2 492 aaKnown RBP14.98□□□□□ -0.01
USE1-208ENST00000600970 TACO1Q9BSH4 297 aaKnown RBP14.98□□□□□ -0.01
USE1-208ENST00000600970 FAM120CQ9NX05 1096 aaKnown RBP14.98□□□□□ -0.01
USE1-208ENST00000600970 ZNF225Q9UK10 706 aa14.98□□□□□ -0.01
USE1-208ENST00000600970 LIPT1Q9Y234 373 aa14.98□□□□□ -0.01
USE1-208ENST00000600970 STAB1Q9NY15 2570 aa14.98□□□□□ -0.01
USE1-208ENST00000600970 PRR14LQ5THK1 2151 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 A8MV72 311 aaPredicted RBP14.97□□□□□ -0.01
USE1-208ENST00000600970 GMFGO60234 142 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 ADAM11O75078 769 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 SMIM24O75264 130 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 OTCP00480 354 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 IGHV4-39P01824 125 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 RBP1P09455 135 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 CLK3P49761 638 aaKnown RBP14.97□□□□□ -0.01
USE1-208ENST00000600970 CDH13P55290 713 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 RAE1P78406 368 aaKnown RBP14.97□□□□□ -0.01
USE1-208ENST00000600970 UAP1Q16222 522 aaPredicted RBP14.97□□□□□ -0.01
USE1-208ENST00000600970 NCMAPQ5T1S8 102 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 OR10D3Q8NH80 312 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 FBXO25Q8TCJ0 367 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 ZNF483Q8TF39 744 aaPredicted RBP14.97□□□□□ -0.01
USE1-208ENST00000600970 SMAP2Q8WU79 429 aaPredicted RBP14.97□□□□□ -0.01
USE1-208ENST00000600970 S100PBPQ96BU1 408 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 ADGRG7Q96K78 797 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 C12orf49Q9H741 205 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 SLC35C2Q9NQQ7 365 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 GIMAP4Q9NUV9 329 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 SENP1Q9P0U3 644 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 XPR1Q9UBH6 696 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 STOML1Q9UBI4 398 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 VDAC3Q9Y277 283 aa14.97□□□□□ -0.01
USE1-208ENST00000600970 ABCA1O95477 2261 aa14.96□□□□□ -0.01
USE1-208ENST00000600970 IGLV3-32A0A0A0MS00 114 aa14.96□□□□□ -0.01
USE1-208ENST00000600970 CLOCKO15516 846 aa14.96□□□□□ -0.01
USE1-208ENST00000600970 PCDH7O60245 1069 aa14.96□□□□□ -0.01
USE1-208ENST00000600970 COQ9O75208 318 aa14.96□□□□□ -0.01
USE1-208ENST00000600970 NDUFS7O75251 213 aa14.96□□□□□ -0.01
USE1-208ENST00000600970 OR4F21O95013 312 aa14.96□□□□□ -0.01
USE1-208ENST00000600970 IL33O95760 270 aa14.96□□□□□ -0.01
USE1-208ENST00000600970 CHN1P15882 459 aa14.96□□□□□ -0.01
USE1-208ENST00000600970 AGTR1P30556 359 aa14.96□□□□□ -0.01
USE1-208ENST00000600970 MPIP34949 423 aa14.96□□□□□ -0.01
USE1-208ENST00000600970 GUCY2DQ02846 1103 aa14.96□□□□□ -0.01
USE1-208ENST00000600970 C17orf67Q0P5P2 114 aa14.96□□□□□ -0.01
USE1-208ENST00000600970 DECR1Q16698 335 aa14.96□□□□□ -0.01
USE1-208ENST00000600970 ZNF672Q499Z4 452 aaPredicted RBP14.96□□□□□ -0.01
USE1-208ENST00000600970 TCHHL1Q5QJ38 904 aaPredicted RBP14.96□□□□□ -0.01
USE1-208ENST00000600970 MFSD12Q6NUT3 480 aa14.96□□□□□ -0.01
USE1-208ENST00000600970 STK32CQ86UX6 486 aa14.96□□□□□ -0.01
USE1-208ENST00000600970 STEAP2Q8NFT2 490 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms