RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 TMEM19Q96HH6 336 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 SGCZQ96LD1 299 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 SH3GL1Q99961 368 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 P2RX2Q9UBL9 471 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 LIPT1Q9Y234 373 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 A0A0G2JMM0 328 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 A0A1W2PPB8 328 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 A0A1W2PRS3 328 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 KIR3DP1A8MWS1 328 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 G3V3Y1 287 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 ADAM10O14672 748 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 SLC28A2O43868 658 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 DPM1O60762 260 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 ABCB7O75027 752 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 H6PDO95479 791 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 NR2F1P10589 423 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 PTGDSP41222 190 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 PSMD4P55036 377 aaKnown RBP18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 NADK2Q4G0N4 442 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 RPS26P11Q5JNZ5 115 aaPredicted RBP18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 PRAMEF20Q5VT98 475 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 SLC25A25Q6KCM7 469 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 HMGN2P46Q86SG4 172 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 SERPINA11Q86U17 422 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 HPS6Q86YV9 775 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 PSD4Q8NDX1 1056 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 NBEAQ8NFP9 2946 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 OR4C3Q8NH37 302 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 NFKBIDQ8NI38 313 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 RNF138Q8WVD3 245 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 SCMH1Q96GD3 660 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 ZNF583Q96ND8 569 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 TRNT1Q96Q11 434 aaKnown RBP18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 ECSITQ9BQ95 431 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 G6PC3Q9BUM1 346 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 SLC38A1Q9H2H9 487 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 TMEM38AQ9H6F2 299 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 PROK2Q9HC23 129 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 KLHL1Q9NR64 748 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 DEPPQ9NTK1 212 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 ABCD2Q9UBJ2 740 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 PACSIN3Q9UKS6 424 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 MKLN1Q9UL63 735 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 WDR45Q9Y484 360 aa18.36■□□□□ 0.53
SHKBP1-222ENST00000600320 EML6Q6ZMW3 1958 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 CENPVL1A0A0U1RR11 272 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 NPIPB9F8W1W9 429 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 TP53I11O14683 189 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 STX11O75558 287 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 SP1P08047 785 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 ATP6V1C1P21283 382 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 MNAT1P51948 309 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 GPR68Q15743 365 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 CYP51A1Q16850 503 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 ZNF766Q5HY98 468 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 SLC22A10Q63ZE4 541 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 SLC6A19Q695T7 634 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 APOOLQ6UXV4 268 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 LRRC74BQ6ZQY2 392 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 DEFB107AQ8IZN7 70 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 FBXW8Q8N3Y1 598 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 GRHL3Q8TE85 626 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 NTNG2Q96CW9 530 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 WBP1Q96G27 269 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 RTN4RQ9BZR6 473 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 SAP130Q9H0E3 1048 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 SLC25A18Q9H1K4 315 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 TIMMDC1Q9NPL8 285 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 THUMPD1Q9NXG2 353 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 LUZP4Q9P127 313 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 TMEM181Q9P2C4 612 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 KCNE5Q9UJ90 142 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 L3MBTL1Q9Y468 752 aa18.35■□□□□ 0.53
SHKBP1-222ENST00000600320 TRAV17A0A0B4J275 112 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 PINLYPA6NC86 204 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 PRAMEF25A6NGN4 478 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 HS6ST1O60243 411 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 NME2P1O60361 137 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 FADS1O60427 444 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 OXSR1O95747 527 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 GUSBP08236 651 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 CD46P15529 392 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 NME2P22392 152 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 DCTP40126 519 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 CASP3P42574 277 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 GPR85P60893 370 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 CDK6Q00534 326 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 LIPEQ05469 1076 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 PLEKHN1Q494U1 663 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 FLYWCH1Q4VC44 716 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 COLEC12Q5KU26 742 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 C16orf89Q6UX73 402 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 GALNTL5Q7Z4T8 443 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 ZNF619Q8N2I2 560 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 POGLUT1Q8NBL1 392 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 SLC7A6OSQ96CW6 309 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 ZG16BQ96DA0 208 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 TMCO6Q96DC7 493 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 C5orf34Q96MH7 638 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 SECISBP2Q96T21 854 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms