RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 WIF1Q9Y5W5 379 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 PRAMEF27A3QJZ7 478 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 WIPF3A6NGB9 483 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 NPIPB9F8W1W9 429 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 DYNC1I1O14576 645 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 GNB5O14775 395 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 SLC19A2O60779 497 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 UTS2O95399 124 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 HPNP05981 417 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 NGFRP08138 427 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 FUT5Q11128 374 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 SPDYE7PQ495Y7 208 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 GTDC1Q4AE62 458 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 TIGD2Q4W5G0 525 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 EMC4Q5J8M3 183 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 BLOC1S3Q6QNY0 202 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 SPPL2CQ8IUH8 684 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 OR4C3Q8NH37 302 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 GTF2H4Q92759 462 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 PHF12Q96QT6 1004 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 ACKR4Q9NPB9 350 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 SPRR3Q9UBC9 169 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 PCNX1Q96RV3 2341 aa17.79■□□□□ 0.44
SHKBP1-221ENST00000599833 ACOT7O00154 380 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 PDE9AO76083 593 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 KCNH1O95259 989 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 CAPN3P20807 821 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 KRT20P35900 424 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 CA7P43166 264 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 CASP9P55211 416 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 POU6F2P78424 691 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 C3AR1Q16581 482 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 AP1ARQ63HQ0 302 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 HEPHL1Q6MZM0 1159 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 ANGPTL8Q6UXH0 198 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 COX18Q8N8Q8 333 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 FADS6Q8N9I5 356 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 CHDHQ8NE62 594 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 VPS37AQ8NEZ2 397 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 RELTQ969Z4 430 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 JSRP1Q96MG2 331 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 ZBTB18Q99592 522 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 SLC35A5Q9BS91 424 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 TMEM120AQ9BXJ8 343 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 KLRF1Q9NZS2 232 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 FBXL2Q9UKC9 423 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 ABCG2Q9UNQ0 655 aa17.78■□□□□ 0.44
SHKBP1-221ENST00000599833 CCDC154A6NI56 674 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 GSNP06396 782 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 ZCCHC18P0CG32 403 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 MATN1P21941 496 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 ELAVL4P26378 380 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 LRRC74AQ0VAA2 488 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 SQLEQ14534 574 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 DCST2Q5T1A1 773 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 C1QL3Q5VWW1 255 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 SLC2A7Q6PXP3 512 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 PACS2Q86VP3 889 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 ADAMTS15Q8TE58 950 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 ZFP90Q8TF47 636 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 JADE3Q92613 823 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 SLC35G5Q96KT7 338 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 PANX1Q96RD7 426 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 SDF2Q99470 211 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 KLHDC3Q9BQ90 382 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 PAIP1Q9H074 479 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 SLC6A15Q9H2J7 730 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 OR51I1Q9H343 314 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 TMEM45AQ9NWC5 275 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 CCDC167Q9P0B6 97 aa17.77■□□□□ 0.44
SHKBP1-221ENST00000599833 IGLV3-32A0A0A0MS00 114 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 TRBV5-3A0A0A0MS03 114 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 A0A0G2JND7 137 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 ALG1L2C9J202 215 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 AQP7O14520 342 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 SUSD5O60279 629 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 CDC40O60508 579 aaKnown RBP eCLIP17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 OXSR1O95747 527 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 LDLRP01130 860 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 TBXA2RP21731 343 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 LCN1P31025 176 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 RFX3P48380 749 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 IRX1P78414 480 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 ELOAQ14241 798 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 SLC10A1Q14973 349 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 MAPK11Q15759 364 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 C4orf17Q53FE4 359 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 PAGE3Q5JUK9 113 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 OR5M10Q6IEU7 315 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 ARHGAP11AQ6P4F7 1023 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 BHLHB9Q6PI77 547 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 OLIG3Q7RTU3 272 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 MARCH3Q86UD3 253 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 DOLPP1Q86YN1 238 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 PLCZ1Q86YW0 608 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 MSRB3Q8IXL7 192 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 FAM26EQ8N5C1 309 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 OR1J4Q8NGS1 313 aa17.76■□□□□ 0.43
SHKBP1-221ENST00000599833 FAM57AQ8TBR7 257 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms