RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 PSMG1O95456 288 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 SNRPB2P08579 225 aaKnown RBP12.88□□□□□ -0.35
LIG1-218ENST00000599322 LAMP1P11279 417 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 G6PDP11413 515 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 BMP7P18075 431 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 DPP4P27487 766 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 LCN1P31025 176 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 SOAT1P35610 550 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 PTGDSP41222 190 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 CLNS1AP54105 237 aaKnown RBP12.88□□□□□ -0.35
LIG1-218ENST00000599322 CRYZQ08257 329 aaKnown RBP12.88□□□□□ -0.35
LIG1-218ENST00000599322 BST1Q10588 318 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 STX5Q13190 355 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 GANABQ14697 944 aaKnown RBP12.88□□□□□ -0.35
LIG1-218ENST00000599322 ANXA8L1Q5VT79 327 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 FNDC7Q5VTL7 733 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 OR5M10Q6IEU7 315 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 GDF7Q7Z4P5 450 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 CCDC71Q8IV32 467 aaPredicted RBP12.88□□□□□ -0.35
LIG1-218ENST00000599322 WDSUB1Q8N9V3 476 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 ADAMTS15Q8TE58 950 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 COQ8BQ96D53 544 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 UGT2B28Q9BY64 529 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 OR2B2Q9GZK3 357 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 TMBIM4Q9HC24 238 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 NTMQ9P121 344 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 ZNF407Q9C0G0 2248 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 FBN2P35556 2912 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 DNAJC13O75165 2243 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 H3BNH8 94 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 LINC01387J3KSC0 135 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 SCDO00767 359 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 UTS2O95399 124 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 EPPINO95925 133 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 EFNA1P20827 205 aaPredicted RBP12.87□□□□□ -0.35
LIG1-218ENST00000599322 ENDOUP21128 410 aaKnown RBP12.87□□□□□ -0.35
LIG1-218ENST00000599322 GRNP28799 593 aaKnown RBP12.87□□□□□ -0.35
LIG1-218ENST00000599322 ARRB2P32121 409 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 DIO3P55073 304 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 EEFSECP57772 596 aaKnown RBP12.87□□□□□ -0.35
LIG1-218ENST00000599322 POU6F2P78424 691 aaPredicted RBP12.87□□□□□ -0.35
LIG1-218ENST00000599322 CASP8Q14790 479 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 DPY19L1Q2PZI1 675 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 SLC25A35Q3KQZ1 300 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 MFSD12Q6NUT3 480 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 MEX3BQ6ZN04 569 aaKnown RBP12.87□□□□□ -0.35
LIG1-218ENST00000599322 WDR53Q7Z5U6 358 aaPredicted RBP12.87□□□□□ -0.35
LIG1-218ENST00000599322 MISPQ8IVT2 679 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 MCEMP1Q8IX19 187 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 MARVELD2Q8N4S9 558 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 ZNF527Q8NB42 609 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 GOT1L1Q8NHS2 421 aaPredicted RBP12.87□□□□□ -0.35
LIG1-218ENST00000599322 SFXN5Q8TD22 340 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 PIK3R3Q92569 461 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 FAM120BQ96EK7 910 aaKnown RBP12.87□□□□□ -0.35
LIG1-218ENST00000599322 TRIB1Q96RU8 372 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 STACQ99469 402 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 ZBTB18Q99592 522 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 SPOCK3Q9BQ16 436 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 BTBD2Q9BX70 525 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 ACTRT3Q9BYD9 372 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 NUF2Q9BZD4 464 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 PRDM14Q9GZV8 571 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 HOXD1Q9GZZ0 328 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 DSN1Q9H410 356 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 MANSC1Q9H8J5 431 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 ZNF395Q9H8N7 513 aaPredicted RBP12.87□□□□□ -0.35
LIG1-218ENST00000599322 FAM215AQ9Y5M1 114 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 PDZD2O15018 2839 aa12.87□□□□□ -0.35
LIG1-218ENST00000599322 TEP1Q99973 2627 aaKnown RBP12.86□□□□□ -0.35
LIG1-218ENST00000599322 GXYLT2A0PJZ3 443 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 DUXAA6NLW8 204 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 HDAC3O15379 428 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 NDUFB5O43674 189 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 C6orf47O95873 294 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 HMGN2P05204 90 aaKnown RBP12.86□□□□□ -0.35
LIG1-218ENST00000599322 PEPDP12955 493 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 CPN1P15169 458 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 HK1P19367 917 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 CHMP24386 653 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 MSX1P28360 303 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 PEX19P40855 299 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 KIR3DL1P43629 444 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 EEF1A1P68104 462 aaKnown RBP12.86□□□□□ -0.35
LIG1-218ENST00000599322 SRYQ05066 204 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 MPP2Q14168 576 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 LASP1Q14847 261 aaKnown RBP12.86□□□□□ -0.35
LIG1-218ENST00000599322 ACSF3Q4G176 576 aaPredicted RBP12.86□□□□□ -0.35
LIG1-218ENST00000599322 AGBL2Q5U5Z8 902 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 EEF1A1P5Q5VTE0 462 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 RAET1LQ5VY80 246 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 SPATA19Q7Z5L4 167 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 RPRMLQ8N4K4 120 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 MEIOBQ8N635 442 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 KRTCAP2Q8N6L1 136 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 FBXO30Q8TB52 745 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 ZPLD1Q8TCW7 415 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 DUSP19Q8WTR2 217 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 NTNG2Q96CW9 530 aa12.86□□□□□ -0.35
LIG1-218ENST00000599322 YIPF4Q9BSR8 244 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms