RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	ACSM2B	Q68CK6	577 aa		13.24	□□□□□ -0.29
IRF3-223	ENST00000599223	GALNT18	Q6P9A2	607 aa		13.24	□□□□□ -0.29
IRF3-223	ENST00000599223	BTLA	Q7Z6A9	289 aa		13.24	□□□□□ -0.29
IRF3-223	ENST00000599223	CIART	Q8N365	385 aa	Predicted RBP	13.24	□□□□□ -0.29
IRF3-223	ENST00000599223	CNEP1R1	Q8N9A8	125 aa		13.24	□□□□□ -0.29
IRF3-223	ENST00000599223	OR4K17	Q8NGC6	315 aa		13.24	□□□□□ -0.29
IRF3-223	ENST00000599223	CDC26	Q8NHZ8	85 aa		13.24	□□□□□ -0.29
IRF3-223	ENST00000599223	METTL6	Q8TCB7	284 aa		13.24	□□□□□ -0.29
IRF3-223	ENST00000599223	WFIKKN1	Q96NZ8	548 aa		13.24	□□□□□ -0.29
IRF3-223	ENST00000599223	HS3ST6	Q96QI5	342 aa		13.24	□□□□□ -0.29
IRF3-223	ENST00000599223	DSN1	Q9H410	356 aa		13.24	□□□□□ -0.29
IRF3-223	ENST00000599223	GSTO2	Q9H4Y5	243 aa		13.24	□□□□□ -0.29
IRF3-223	ENST00000599223	NEUROD4	Q9HD90	331 aa		13.24	□□□□□ -0.29
IRF3-223	ENST00000599223	KCNK9	Q9NPC2	374 aa		13.24	□□□□□ -0.29
IRF3-223	ENST00000599223	PPP4R1L	Q9P1A2	415 aa		13.24	□□□□□ -0.29
IRF3-223	ENST00000599223	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.24	□□□□□ -0.29
IRF3-223	ENST00000599223	JMJD1C	Q15652	2540 aa		13.24	□□□□□ -0.29
IRF3-223	ENST00000599223	UBFD1	O14562	309 aa	Known RBP	13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	SEC14L5	O43304	696 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	FADS1	O60427	444 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	ULK1	O75385	1050 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	BCAS2	O75934	225 aa	Predicted RBP	13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	PSMG1	O95456	288 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	JUN	P05412	331 aa	Known RBP	13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	INHBB	P09529	407 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	KRT20	P35900	424 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	DIO3	P55073	304 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	CLDN20	P56880	219 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	BTK	Q06187	659 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	LCP2	Q13094	533 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	GAB1	Q13480	694 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	TNFAIP8L3	Q5GJ75	292 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223		Q5PR19	223 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	SH2D4B	Q5SQS7	431 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	RAET1L	Q5VY80	246 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	TMEM107	Q6UX40	140 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	C22orf34	Q6ZV56	151 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	ZNF550	Q7Z398	422 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	P4HA3	Q7Z4N8	544 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	GBP7	Q8N8V2	638 aa	Predicted RBP	13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	FNDC9	Q8TBE3	224 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	L3HYPDH	Q96EM0	354 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	ZNF845	Q96IR2	970 aa	Predicted RBP	13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	MARK4	Q96L34	752 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	MED11	Q9P086	117 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	OR10H1	Q9Y4A9	318 aa		13.23	□□□□□ -0.29
IRF3-223	ENST00000599223	CSPG4	Q6UVK1	2322 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	MYO1G	B0I1T2	1018 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	SHISA8	B8ZZ34	492 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	GOLGA8R	I6L899	631 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	CGA	P01215	116 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	ANXA4	P09525	319 aa	Predicted RBP	13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	HK1	P19367	917 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	DDC	P20711	480 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	ATP5F1	P24539	256 aa	Predicted RBP	13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	LOX	P28300	417 aa	Predicted RBP	13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	PRKAA2	P54646	552 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	DSCR4	P56555	118 aa	Predicted RBP	13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	ZNF763	Q0D2J5	394 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	HEPACAM	Q14CZ8	416 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	GUSBP1	Q15486	140 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	BCL2A1	Q16548	175 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	TIFAB	Q6ZNK6	161 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	TRABD2A	Q86V40	505 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	EXOC3L1	Q86VI1	746 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.22	□□□□□ -0.29	7e-6	■■■■□ 22
IRF3-223	ENST00000599223	DYDC1	Q8WWB3	177 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	ARSG	Q96EG1	525 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	PINK1	Q9BXM7	581 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	IQCG	Q9H095	443 aa	Known RBP	13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	RNF122	Q9H9V4	155 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	TNFRSF12A	Q9NP84	129 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	GIMAP4	Q9NUV9	329 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	TAS2R9	Q9NYW1	312 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	EMCN	Q9ULC0	261 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	ZNF337	Q9Y3M9	751 aa		13.22	□□□□□ -0.29
IRF3-223	ENST00000599223	ANK3	Q12955	4377 aa	Known RBP	13.21	□□□□□ -0.29
IRF3-223	ENST00000599223		A0A087WV62	115 aa		13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	OR2M5	A3KFT3	312 aa		13.21	□□□□□ -0.29
IRF3-223	ENST00000599223		H3BML4	177 aa		13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	UPK1A	O00322	258 aa		13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	COQ9	O75208	318 aa		13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	ENO1	P06733	434 aa	Known RBP	13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	CRH	P06850	196 aa		13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	PEPD	P12955	493 aa		13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	TAC1	P20366	129 aa		13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	IMPDH1	P20839	514 aa		13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	CRYGS	P22914	178 aa		13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	ADSL	P30566	484 aa	Predicted RBP	13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	UGT2B10	P36537	528 aa		13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	CD79B	P40259	229 aa		13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	NCBP2	P52298	156 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	GYS2	P54840	703 aa		13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	FAM71E1	Q6IPT2	247 aa		13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	CLEC9A	Q6UXN8	241 aa		13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	APOOL	Q6UXV4	268 aa		13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	OR2L13	Q8N349	312 aa		13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	MZB1	Q8WU39	189 aa		13.21	□□□□□ -0.29
IRF3-223	ENST00000599223	C1GALT1C1	Q96EU7	318 aa		13.21	□□□□□ -0.29

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