RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 SLC30A6Q6NXT4 461 aa12.97□□□□□ -0.33
SHKBP1-217ENST00000598558 TNFAIP8L2Q6P589 184 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-217ENST00000598558 ANGPTL8Q6UXH0 198 aa12.97□□□□□ -0.33
SHKBP1-217ENST00000598558 RNF130Q86XS8 419 aa12.97□□□□□ -0.33
SHKBP1-217ENST00000598558 PRR7Q8TB68 274 aa12.97□□□□□ -0.33
SHKBP1-217ENST00000598558 PNPT1Q8TCS8 783 aaKnown RBP12.97□□□□□ -0.33
SHKBP1-217ENST00000598558 ZFP90Q8TF47 636 aa12.97□□□□□ -0.33
SHKBP1-217ENST00000598558 SPDL1Q96EA4 605 aa12.97□□□□□ -0.33
SHKBP1-217ENST00000598558 CHMP6Q96FZ7 201 aa12.97□□□□□ -0.33
SHKBP1-217ENST00000598558 TMEM41AQ96HV5 264 aa12.97□□□□□ -0.33
SHKBP1-217ENST00000598558 SDF2Q99470 211 aa12.97□□□□□ -0.33
SHKBP1-217ENST00000598558 SLC25A37Q9NYZ2 338 aa12.97□□□□□ -0.33
SHKBP1-217ENST00000598558 KLRF1Q9NZS2 232 aa12.97□□□□□ -0.33
SHKBP1-217ENST00000598558 TNFRSF10DQ9UBN6 386 aa12.97□□□□□ -0.33
SHKBP1-217ENST00000598558 FBXL2Q9UKC9 423 aa12.97□□□□□ -0.33
SHKBP1-217ENST00000598558 OSGIN2Q9Y236 505 aa12.97□□□□□ -0.33
SHKBP1-217ENST00000598558 ZNF835Q9Y2P0 537 aa12.97□□□□□ -0.33
SHKBP1-217ENST00000598558 PCDHB14Q9Y5E9 798 aa12.97□□□□□ -0.33
SHKBP1-217ENST00000598558 CLEC18AA5D8T8 446 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 SCO2O43819 266 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 CDC40O60508 579 aaKnown RBP eCLIP12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 FCMRO60667 390 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 IGHG3P01860 377 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 ZCCHC18P0CG32 403 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 ENDOUP21128 410 aaKnown RBP12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 DRD4P21917 467 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 EVI2BP34910 448 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 TRPC1P48995 793 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 PSPHP78330 225 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 RPP38P78345 283 aaKnown RBP12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 UBAP2LQ14157 1087 aaKnown RBP12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 SLC10A1Q14973 349 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 MAPK11Q15759 364 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 KRTCAP3Q53RY4 240 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 DCST2Q5T1A1 773 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 METTL21CQ5VZV1 264 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 HEPHL1Q6MZM0 1159 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 CLEC18BQ6UXF7 455 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 MSANTD1Q6ZTZ1 278 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 TRILQ7L0X0 811 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 PACS2Q86VP3 889 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 RETREG3Q86VR2 466 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 SLC22A16Q86VW1 577 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 SPPL2CQ8IUH8 684 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 FAM109AQ8N4B1 249 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 CLEC18CQ8NCF0 446 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 CHDHQ8NE62 594 aaPredicted RBP12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 XAGE5Q8WWM1 108 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 ITCHQ96J02 903 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 ZNF597Q96LX8 424 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 SLC6A15Q9H2J7 730 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 SAR1AQ9NR31 198 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 KLHL14Q9P2G3 628 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 KCNE5Q9UJ90 142 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 BOKQ9UMX3 212 aaPredicted RBP12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 C15orf41Q9Y2V0 281 aa12.96□□□□□ -0.33
SHKBP1-217ENST00000598558 UBR5O95071 2799 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 TENM4Q6N022 2769 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 CENPVL1A0A0U1RR11 272 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 NPIPB9F8W1W9 429 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 HMGN4O00479 90 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 OXSR1O95747 527 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 RNF224P0DH78 156 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 LSP1P33241 339 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 CHI3L1P36222 383 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 MASP1P48740 699 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 KCNC4Q03721 635 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 EIPR1Q53HC9 387 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 EMC4Q5J8M3 183 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 BHLHB9Q6PI77 547 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 DLEU7Q6UYE1 221 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 BNC2Q6ZN30 1099 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 GHDCQ8N2G8 530 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 C10orf111Q8N326 155 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 OR1J4Q8NGS1 313 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 DUSP19Q8WTR2 217 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 ZG16BQ96DA0 208 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 ELAC2Q9BQ52 826 aaKnown RBP12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 RABEP2Q9H5N1 569 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 TMEM45AQ9NWC5 275 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 MED11Q9P086 117 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 SPRR3Q9UBC9 169 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 WIF1Q9Y5W5 379 aa12.95□□□□□ -0.34
SHKBP1-217ENST00000598558 HELZ2Q9BYK8 2649 aaKnown RBP12.94□□□□□ -0.34
SHKBP1-217ENST00000598558 FASNP49327 2511 aaKnown RBP12.94□□□□□ -0.34
SHKBP1-217ENST00000598558 A0A096LPI6 279 aa12.94□□□□□ -0.34
SHKBP1-217ENST00000598558 TRBV5-3A0A0A0MS03 114 aa12.94□□□□□ -0.34
SHKBP1-217ENST00000598558 A0A1B0GVC2 190 aa12.94□□□□□ -0.34
SHKBP1-217ENST00000598558 A0A1W2PP18 115 aa12.94□□□□□ -0.34
SHKBP1-217ENST00000598558 ACOT7O00154 380 aa12.94□□□□□ -0.34
SHKBP1-217ENST00000598558 FBP2O00757 339 aa12.94□□□□□ -0.34
SHKBP1-217ENST00000598558 OIP5O43482 229 aa12.94□□□□□ -0.34
SHKBP1-217ENST00000598558 KRT16P08779 473 aa12.94□□□□□ -0.34
SHKBP1-217ENST00000598558 STSP08842 583 aa12.94□□□□□ -0.34
SHKBP1-217ENST00000598558 ETFAP13804 333 aa12.94□□□□□ -0.34
SHKBP1-217ENST00000598558 TBXA2RP21731 343 aa12.94□□□□□ -0.34
SHKBP1-217ENST00000598558 IRX1P78414 480 aaPredicted RBP12.94□□□□□ -0.34
SHKBP1-217ENST00000598558 LRRC74AQ0VAA2 488 aa12.94□□□□□ -0.34
SHKBP1-217ENST00000598558 KLF10Q13118 480 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms