RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 COQ9O75208 318 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 CBR3O75828 277 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 PSMG1O95456 288 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 BPGMP07738 259 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 PRPH2P23942 346 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 GRK2P25098 689 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 CEACAM8P31997 349 aaPredicted RBP12.5□□□□□ -0.41
SCAF1-203ENST00000598359 PNLIPRP2P54317 469 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 STX5Q13190 355 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 GAB1Q13480 694 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 EFR3AQ14156 821 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 UGT3A2Q3SY77 523 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 IKBIPQ70UQ0 350 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 GALNT10Q86SR1 603 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 LACC1Q8IV20 430 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 PM20D2Q8IYS1 436 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 OR2L13Q8N349 312 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 FBXO30Q8TB52 745 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 NUDT8Q8WV74 236 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 TWIST2Q8WVJ9 160 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 FCRL1Q96LA6 429 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 TUBA1CQ9BQE3 449 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 TRMOQ9BU70 441 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 RTN4RQ9BZR6 473 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 OR2B2Q9GZK3 357 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 TAS2R10Q9NYW0 307 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 RPH3AQ9Y2J0 694 aaPredicted RBP12.5□□□□□ -0.41
SCAF1-203ENST00000598359 TRAF6Q9Y4K3 522 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 USH1CQ9Y6N9 552 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 ARHGAP21Q5T5U3 1957 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 HSPB2A8KAH6 182 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 FAM47E-STBD1D6RA91 191 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 PLOD2O00469 737 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 NPHS1O60500 1241 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 CHEK2O96017 543 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 TROVE2P10155 538 aaKnown RBP eCLIP12.49□□□□□ -0.41
SCAF1-203ENST00000598359 UQCRC1P31930 480 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 EVI2BP34910 448 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 ZNF136P52737 540 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 PRKAG1P54619 331 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 MYBPHQ13203 477 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 HSPB2Q16082 182 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 SLC25A35Q3KQZ1 300 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 CES4AQ5XG92 561 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 NSUN5P2Q63ZY6 315 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 ATG16L1Q676U5 607 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 POMZP3Q6PJE2 187 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 IFNEQ86WN2 208 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 CLYBLQ8N0X4 340 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 C9orf106Q8NAJ2 232 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 RNF138Q8WVD3 245 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 PIK3R3Q92569 461 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 PPCDCQ96CD2 204 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 OTUB1Q96FW1 271 aaPredicted RBP12.49□□□□□ -0.41
SCAF1-203ENST00000598359 CCT7Q99832 543 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 ZNF559Q9BR84 538 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 DSN1Q9H410 356 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 REEP4Q9H6H4 257 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 SH3BP4Q9P0V3 963 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 DKKL1Q9UK85 242 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 CBLCQ9ULV8 474 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 WBP11Q9Y2W2 641 aaKnown RBP12.49□□□□□ -0.41
SCAF1-203ENST00000598359 L3MBTL1Q9Y468 752 aa12.49□□□□□ -0.41
SCAF1-203ENST00000598359 NPIPB8E9PQR5 432 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 H0Y3Z8 333 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 GMFGO60234 142 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 FADS1O60427 444 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 ZIC3O60481 467 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 PEX11AO75192 247 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 SNNO75324 88 aaPredicted RBP12.48□□□□□ -0.41
SCAF1-203ENST00000598359 SKAP2O75563 359 aaPredicted RBP12.48□□□□□ -0.41
SCAF1-203ENST00000598359 ACTL6AO96019 429 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 IL2RAP01589 272 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 IGKV1D-16P01601 117 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 NEFHP12036 1026 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 BCKDHAP12694 445 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 BGNP21810 368 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 DPP4P27487 766 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 SRD5A2P31213 254 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 GABRA3P34903 492 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 GPC1P35052 558 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 TIMP3P35625 211 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 GFRA1P56159 465 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 OCRLQ01968 901 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 CYP27C1Q4G0S4 372 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 ARSKQ6UWY0 536 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 SZRD1Q7Z422 152 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 MARCH3Q86UD3 253 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 OR4K17Q8NGC6 315 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 NRGNQ92686 78 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 METTL2AQ96IZ6 378 aaKnown RBP12.48□□□□□ -0.41
SCAF1-203ENST00000598359 C3orf30Q96M34 536 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 SFXN2Q96NB2 322 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 G6PC3Q9BUM1 346 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 C1orf50Q9BV19 199 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 Q9N2J8 555 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 MED11Q9P086 117 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 PPP4R1LQ9P1A2 415 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 ZDHHC2Q9UIJ5 367 aa12.48□□□□□ -0.41
SCAF1-203ENST00000598359 WDR91A4D1P6 747 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms