RNA–Protein interactions for RNA: ENST00000597423.1

TRIM28-209, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-209ENST00000597423 TBC1D25Q3MII6 688 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 LIN52Q52LA3 116 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 CCNJQ5T5M9 372 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 FBXW10Q5XX13 1052 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 JMJD6Q6NYC1 403 aaPredicted RBP14.09□□□□□ -0.15
TRIM28-209ENST00000597423 DHRS4L2Q6PKH6 230 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 ENPP6Q6UWR7 440 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 MRGPREQ86SM8 312 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 ZNF441Q8N8Z8 693 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 OR4N2Q8NGD1 307 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 DIO2Q92813 273 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 SLCO4A1Q96BD0 722 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 ZNF354BQ96LW1 612 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 IL1RAPQ9NPH3 570 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 UBQLN4Q9NRR5 601 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 MYOTQ9UBF9 498 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 STOML1Q9UBI4 398 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 FBXL4Q9UKA2 621 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 PCDHGA10Q9Y5H3 936 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 H3BNH8 94 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 SYT5O00445 386 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 GNGT2O14610 69 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 KIAA0513O60268 411 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 DEAF1O75398 565 aaPredicted RBP14.08□□□□□ -0.16
TRIM28-209ENST00000597423 LDLRP01130 860 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 OPN1SWP03999 348 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 IFNW1P05000 195 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 FABP3P05413 133 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 SERPINA7P05543 415 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 FESP07332 822 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 IFNA8P32881 189 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 TMED10P49755 219 aaKnown RBP14.08□□□□□ -0.16
TRIM28-209ENST00000597423 NNATQ16517 81 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 GALNT10Q86SR1 603 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 CYP4Z1Q86W10 505 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 ZDHHC21Q8IVQ6 265 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 CMIPQ8IY22 773 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 PQLC1Q8N2U9 271 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 SLC5A8Q8N695 610 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 SMYD1Q8NB12 490 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 THAP4Q8WY91 577 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 TMBIM1Q969X1 311 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 ZNF347Q96SE7 839 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 BDH2Q9BUT1 245 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 HHATLQ9HCP6 504 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 ATP13A2Q9NQ11 1180 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 SH3GLB1Q9Y371 365 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 NPFFR2Q9Y5X5 522 aa14.08□□□□□ -0.16
TRIM28-209ENST00000597423 FER1L5A0AVI2 2057 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 H3BNX3 289 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 SCDO00767 359 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 LGI1O95970 557 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 LIFP15018 202 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 CRYBA2P53672 197 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 KCNJ10P78508 379 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 ZNF141Q15928 474 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 DUSP7Q16829 419 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 NUP54Q7Z3B4 507 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 PIWIL3Q7Z3Z3 882 aaKnown RBP14.07□□□□□ -0.16
TRIM28-209ENST00000597423 VTCN1Q7Z7D3 282 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 DND1Q8IYX4 353 aaKnown RBP14.07□□□□□ -0.16
TRIM28-209ENST00000597423 FGF11Q92914 225 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 TMCO6Q96DC7 493 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 OMA1Q96E52 524 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 ADOQ96SZ5 270 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 MESP1Q9BRJ9 268 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 VCX3BQ9H321 246 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 DNAJB9Q9UBS3 223 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 IL17BQ9UHF5 180 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 TEKT2Q9UIF3 430 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 ZNF223Q9UK11 482 aaPredicted RBP14.07□□□□□ -0.16
TRIM28-209ENST00000597423 KLK13Q9UKR3 277 aa14.07□□□□□ -0.16
TRIM28-209ENST00000597423 ZNF443Q9Y2A4 671 aaPredicted RBP14.07□□□□□ -0.16
TRIM28-209ENST00000597423 YARS2Q9Y2Z4 477 aaKnown RBP14.07□□□□□ -0.16
TRIM28-209ENST00000597423 CNOT1A5YKK6 2376 aaKnown RBP14.07□□□□□ -0.16
TRIM28-209ENST00000597423 OR6C70A6NIJ9 312 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 WWP2O00308 870 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 CLOCKO15516 846 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 TPST1O60507 370 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 TSPAN2O60636 221 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 TIPRLO75663 272 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 UGT2B17O75795 530 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 NID1P14543 1247 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 CD247P20963 164 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 TBXA2RP21731 343 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 RPS4Y1P22090 263 aaKnown RBP14.06□□□□□ -0.16
TRIM28-209ENST00000597423 ABCD3P28288 659 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 DCTP40126 519 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 RRADP55042 308 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 RPP38P78345 283 aaKnown RBP14.06□□□□□ -0.16
TRIM28-209ENST00000597423 AIMP2Q13155 320 aaKnown RBP14.06□□□□□ -0.16
TRIM28-209ENST00000597423 TGIF1Q15583 401 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 TCTN3Q6NUS6 607 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 OPN5Q6U736 354 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 ERMP1Q7Z2K6 904 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 RPS19BP1Q86WX3 136 aaKnown RBP14.06□□□□□ -0.16
TRIM28-209ENST00000597423 FAM86B1Q8N7N1 296 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 ZSCAN1Q8NBB4 408 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 OR10Q1Q8NGQ4 319 aa14.06□□□□□ -0.16
TRIM28-209ENST00000597423 THAP3Q8WTV1 239 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms