RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 DEFB127Q9H1M4 99 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 SERHL2Q9H4I8 314 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 ZNF385DQ9H6B1 395 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 ABCG2Q9UNQ0 655 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 KCNE3Q9Y6H6 103 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 PCNX3Q9H6A9 2034 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 KRT75O95678 551 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 GDF1P27539 372 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 LSP1P33241 339 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 MAGEA5P43359 124 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 ANXA11P50995 505 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 GNGT1P63211 74 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 RBPJQ06330 500 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 HYAL4Q2M3T9 481 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 GRAMD1BQ3KR37 738 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 CMPK2Q5EBM0 449 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 DCST2Q5T1A1 773 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 ATAD3BQ5T9A4 648 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 OR1J4Q8NGS1 313 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 FAM110BQ8TC76 370 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 MIPOL1Q8TD10 442 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 C10orf82Q8WW14 230 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 GTF2H4Q92759 462 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 MRGBPQ9NV56 204 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 EXD2Q9NVH0 621 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 FLRT3Q9NZU0 649 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 WIF1Q9Y5W5 379 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 NAV2Q8IVL1 2488 aa17.98■□□□□ 0.47
SHKBP1-214ENST00000597396 SNPHO15079 494 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 WISP2O76076 250 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 AGR2O95994 175 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 AK1P00568 194 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 RFPL3SP0C7P2 107 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 ZCCHC18P0CG32 403 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 OR12D1P0DN82 309 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 CAPN3P20807 821 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 ELAVL4P26378 380 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 LCN1P31025 176 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 SEC24CP53992 1094 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 SLC10A1Q14973 349 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 C16orf62Q7Z3J2 963 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 RNF130Q86XS8 419 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 PNPT1Q8TCS8 783 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 XAGE5Q8WWM1 108 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 TBL1XR1Q9BZK7 514 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 FAM107BQ9H098 131 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 ZNF703Q9H7S9 590 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 ZDHHC11Q9H8X9 412 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 SDHAF3Q9NRP4 125 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 FBXO34Q9NWN3 711 aa17.97■□□□□ 0.47
SHKBP1-214ENST00000597396 FADS1O60427 444 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 PDE9AO76083 593 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 HPGDP15428 266 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 HSF1Q00613 529 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 UBAP2LQ14157 1087 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 TOMM20Q15388 145 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 EIF2S3LQ2VIR3 472 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 GTDC1Q4AE62 458 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 FNDC7Q5VTL7 733 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 TIGD3Q6B0B8 471 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 ZAR1Q86SH2 424 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 PRR7Q8TB68 274 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 ZFP90Q8TF47 636 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 RNF138Q8WVD3 245 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 RAB8BQ92930 207 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 NTNG2Q96CW9 530 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 GNRHR2Q96P88 292 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 PHF12Q96QT6 1004 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 ELAC2Q9BQ52 826 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 LDAHQ9H6V9 325 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 EXO5Q9H790 373 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 SLC6A13Q9NSD5 602 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 QPCTLQ9NXS2 382 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 PPP4R1LQ9P1A2 415 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 C15orf41Q9Y2V0 281 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 POLEQ07864 2286 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 DOPEY2Q9Y3R5 2298 aa17.96■□□□□ 0.47
SHKBP1-214ENST00000597396 FLNCQ14315 2725 aa17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 A0A096LPI6 279 aa17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 A0A1W2PP18 115 aa17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 GMNCA6NCL1 334 aa17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 ANGPT2O15123 496 aa17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 TRAPPC6AO75865 159 aa17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 OXSR1O95747 527 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 C1QCP02747 245 aa17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 TXNL4AP83876 142 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 STX5Q13190 355 aa17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 SPATA21Q7Z572 469 aa17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 CPLX4Q7Z7G2 160 aa17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 PLCZ1Q86YW0 608 aa17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 DTNBP1Q96EV8 351 aa17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 SDF2Q99470 211 aa17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 PAIP1Q9H074 479 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 TPT1P8Q9HAU6 139 aa17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 UBQLN4Q9NRR5 601 aa17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 LEF1Q9UJU2 399 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 OSGIN2Q9Y236 505 aa17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 PCDHB14Q9Y5E9 798 aa17.95■□□□□ 0.46
SHKBP1-214ENST00000597396 HIVEP3Q5T1R4 2406 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 SCDO00767 359 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms