RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 OR52P1PQ8NH57 321 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 SPPL2AQ8TCT8 520 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 LRTOMTQ8WZ04 291 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 LZICQ8WZA0 190 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 TPD52L3Q96J77 140 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 GAL3ST4Q96RP7 486 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 LMF1Q96S06 567 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 G6PC3Q9BUM1 346 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 PINK1Q9BXM7 581 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 QRSL1Q9H0R6 528 aaKnown RBP13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 YY1AP1Q9H869 796 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 MMP25Q9NPA2 562 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 IL1RAPQ9NPH3 570 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 AGPAT4Q9NRZ5 378 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 THSD1Q9NS62 852 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 SEC14L3Q9UDX4 400 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 IL17BQ9UHF5 180 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 BAG5Q9UL15 447 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 IFT52Q9Y366 437 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 CHST2Q9Y4C5 530 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 EML6Q6ZMW3 1958 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 ACACAQ13085 2346 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 CASQ2O14958 399 aaPredicted RBP13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 TSPAN2O60636 221 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 PRSS23O95084 383 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 HPP00738 406 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 DBIP07108 87 aaKnown RBP13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 FESP07332 822 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 GCKP35557 465 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 VLDLRP98155 873 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 PUM1Q14671 1186 aaKnown RBP eCLIP13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 GPR68Q15743 365 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 ATP6AP1Q15904 470 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 ZNF141Q15928 474 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 MAPK14Q16539 360 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 DECR1Q16698 335 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 GLIPR1L2Q4G1C9 344 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 FKBP9P1Q75LS8 142 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 HMGN2P46Q86SG4 172 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 MRGPREQ86SM8 312 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 VRK2Q86Y07 508 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 ZDHHC21Q8IVQ6 265 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 PEX5LQ8IYB4 626 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 OR5L2Q8NGL0 311 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 OIT3Q8WWZ8 545 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 GEMIN6Q8WXD5 167 aaKnown RBP13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 TMBIM1Q969X1 311 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 ZNF354BQ96LW1 612 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 ARHGDIGQ99819 225 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 WASF3Q9UPY6 502 aa13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 ZNF443Q9Y2A4 671 aaPredicted RBP13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 MRPS18BQ9Y676 258 aaKnown RBP13.6□□□□□ -0.23
SHKBP1-211ENST00000595945 CPAMD8Q8IZJ3 1885 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 NSG1A0A0A6YYJ2 146 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 NPIPA5A0A0B4J1W7 369 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 TRABD2BA6NFA1 517 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 NPIPA7E9PJI5 369 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 PEX12O00623 359 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 UGT2B17O75795 530 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 LGI1O95970 557 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 MT-ND1P03886 318 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 CELA2AP08217 269 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 NPIPA8P0DM63 369 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 TNFRSF1BP20333 461 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 ATP6V1C1P21283 382 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 FASP25445 335 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 ATP12AP54707 1039 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 PSMD4P55036 377 aaKnown RBP13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 EEF1A1P68104 462 aaKnown RBP13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 KCNC4Q03721 635 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 TGIF1Q15583 401 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 NRF1Q16656 503 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 BTBD16Q32M84 506 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 FLYWCH1Q4VC44 716 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 ZNF311Q5JNZ3 666 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 ZNF836Q6ZNA1 936 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 RAB43Q86YS6 212 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 ARMC10Q8N2F6 343 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 IL22RA1Q8N6P7 574 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 OR4D11Q8NGI4 311 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 NRG4Q8WWG1 115 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 PROX1Q92786 737 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 DIO2Q92813 273 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 NXPE2Q96DL1 559 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 VPS50Q96JG6 964 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 TRIM45Q9H8W5 580 aaPredicted RBP13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 ZNF160Q9HCG1 818 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 P4HTMQ9NXG6 502 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 STOML1Q9UBI4 398 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 FBXL4Q9UKA2 621 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 MRTO4Q9UKD2 239 aaKnown RBP13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 KLK13Q9UKR3 277 aa13.59□□□□□ -0.23
SHKBP1-211ENST00000595945 CLOCKO15516 846 aa13.58□□□□□ -0.24
SHKBP1-211ENST00000595945 DPM1O60762 260 aa13.58□□□□□ -0.24
SHKBP1-211ENST00000595945 ZNF354AO60765 605 aaPredicted RBP13.58□□□□□ -0.24
SHKBP1-211ENST00000595945 FABP3P05413 133 aa13.58□□□□□ -0.24
SHKBP1-211ENST00000595945 NID1P14543 1247 aa13.58□□□□□ -0.24
SHKBP1-211ENST00000595945 ABCD3P28288 659 aa13.58□□□□□ -0.24
SHKBP1-211ENST00000595945 DCTP40126 519 aa13.58□□□□□ -0.24
SHKBP1-211ENST00000595945 PLAURQ03405 335 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms