RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 HK1P19367 917 aa21.26■□□□□ 0.99
LSM4-204ENST00000594828 FRKP42685 505 aaPredicted RBP21.26■□□□□ 0.99
LSM4-204ENST00000594828 B3GALT5-AS1P59052 145 aa21.26■□□□□ 0.99
LSM4-204ENST00000594828 FOXF2Q12947 444 aa21.26■□□□□ 0.99
LSM4-204ENST00000594828 BCL2A1Q16548 175 aa21.26■□□□□ 0.99
LSM4-204ENST00000594828 VPS26BQ4G0F5 336 aa21.26■□□□□ 0.99
LSM4-204ENST00000594828 WDR93Q6P2C0 686 aa21.26■□□□□ 0.99
LSM4-204ENST00000594828 R3HCC1LQ7Z5L2 792 aaKnown RBP21.26■□□□□ 0.99
LSM4-204ENST00000594828 MARCH3Q86UD3 253 aa21.26■□□□□ 0.99
LSM4-204ENST00000594828 KIF18BQ86Y91 864 aa21.26■□□□□ 0.99
LSM4-204ENST00000594828 NUP43Q8NFH3 380 aa21.26■□□□□ 0.99
LSM4-204ENST00000594828 PIK3R3Q92569 461 aa21.26■□□□□ 0.99
LSM4-204ENST00000594828 CAVIN3Q969G5 261 aa21.26■□□□□ 0.99
LSM4-204ENST00000594828 MTERF3Q96E29 417 aa21.26■□□□□ 0.99
LSM4-204ENST00000594828 PPP3R2Q96LZ3 170 aa21.26■□□□□ 0.99
LSM4-204ENST00000594828 TBL1XR1Q9BZK7 514 aa21.26■□□□□ 0.99
LSM4-204ENST00000594828 RTN4RQ9BZR6 473 aa21.26■□□□□ 0.99
LSM4-204ENST00000594828 PTGES2Q9H7Z7 377 aa21.26■□□□□ 0.99
LSM4-204ENST00000594828 DNAJB12Q9NXW2 375 aaKnown RBP21.26■□□□□ 0.99
LSM4-204ENST00000594828 JKAMPQ9P055 326 aa21.26■□□□□ 0.99
LSM4-204ENST00000594828 TMEM114B3SHH9 223 aa21.25■□□□□ 0.99
LSM4-204ENST00000594828 UTS2O95399 124 aa21.25■□□□□ 0.99
LSM4-204ENST00000594828 CREB1P16220 341 aa21.25■□□□□ 0.99
LSM4-204ENST00000594828 SERPINB5P36952 375 aa21.25■□□□□ 0.99
LSM4-204ENST00000594828 FLYWCH1Q4VC44 716 aa21.25■□□□□ 0.99
LSM4-204ENST00000594828 PLXDC2Q6UX71 529 aa21.25■□□□□ 0.99
LSM4-204ENST00000594828 LRIG3Q6UXM1 1119 aa21.25■□□□□ 0.99
LSM4-204ENST00000594828 SZRD1Q7Z422 152 aa21.25■□□□□ 0.99
LSM4-204ENST00000594828 CDRT4Q8N9R6 151 aa21.25■□□□□ 0.99
LSM4-204ENST00000594828 FAM222BQ8WU58 562 aa21.25■□□□□ 0.99
LSM4-204ENST00000594828 SLC9A6Q92581 669 aa21.25■□□□□ 0.99
LSM4-204ENST00000594828 HOXB13Q92826 284 aaPredicted RBP21.25■□□□□ 0.99
LSM4-204ENST00000594828 INTS12Q96CB8 462 aaKnown RBP21.25■□□□□ 0.99
LSM4-204ENST00000594828 RMND5BQ96G75 393 aaPredicted RBP21.25■□□□□ 0.99
LSM4-204ENST00000594828 SFXN3Q9BWM7 321 aa21.25■□□□□ 0.99
LSM4-204ENST00000594828 ACBD3Q9H3P7 528 aa21.25■□□□□ 0.99
LSM4-204ENST00000594828 NTMQ9P121 344 aa21.25■□□□□ 0.99
LSM4-204ENST00000594828 CLCF1Q9UBD9 225 aa21.25■□□□□ 0.99
LSM4-204ENST00000594828 PEX11AO75192 247 aa21.24■□□□□ 0.99
LSM4-204ENST00000594828 NKX2-2O95096 273 aa21.24■□□□□ 0.99
LSM4-204ENST00000594828 SLU7O95391 586 aaKnown RBP21.24■□□□□ 0.99
LSM4-204ENST00000594828 IGKV1D-16P01601 117 aa21.24■□□□□ 0.99
LSM4-204ENST00000594828 PEPDP12955 493 aa21.24■□□□□ 0.99
LSM4-204ENST00000594828 DDX5P17844 614 aaKnown RBP21.24■□□□□ 0.99
LSM4-204ENST00000594828 MAPK1P28482 360 aa21.24■□□□□ 0.99
LSM4-204ENST00000594828 MAP3K8P41279 467 aa21.24■□□□□ 0.99
LSM4-204ENST00000594828 C17orf67Q0P5P2 114 aa21.24■□□□□ 0.99
LSM4-204ENST00000594828 GANABQ14697 944 aaKnown RBP21.24■□□□□ 0.99
LSM4-204ENST00000594828 TESK1Q15569 626 aa21.24■□□□□ 0.99
LSM4-204ENST00000594828 RAET1LQ5VY80 246 aa21.24■□□□□ 0.99
LSM4-204ENST00000594828 CHMP1BQ7LBR1 199 aa21.24■□□□□ 0.99
LSM4-204ENST00000594828 EXOC3L1Q86VI1 746 aa21.24■□□□□ 0.99
LSM4-204ENST00000594828 GRAMD2AQ8IUY3 354 aa21.24■□□□□ 0.99
LSM4-204ENST00000594828 POLDIP3Q9BY77 421 aaKnown RBP21.24■□□□□ 0.99
LSM4-204ENST00000594828 GIMAP2Q9UG22 337 aa21.24■□□□□ 0.99
LSM4-204ENST00000594828 POLQO75417 2590 aa21.24■□□□□ 0.99
LSM4-204ENST00000594828 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.23■□□□□ 0.99
LSM4-204ENST00000594828 TUBAL3A6NHL2 446 aa21.23■□□□□ 0.99
LSM4-204ENST00000594828 EMC8O43402 210 aa21.23■□□□□ 0.99
LSM4-204ENST00000594828 ANGPTL1O95841 491 aa21.23■□□□□ 0.99
LSM4-204ENST00000594828 BPGMP07738 259 aa21.23■□□□□ 0.99
LSM4-204ENST00000594828 PRR5P85299 388 aa21.23■□□□□ 0.99
LSM4-204ENST00000594828 GRAMD1BQ3KR37 738 aa21.23■□□□□ 0.99
LSM4-204ENST00000594828 XKR7Q5GH72 579 aa21.23■□□□□ 0.99
LSM4-204ENST00000594828 UBQLNLQ8IYU4 475 aa21.23■□□□□ 0.99
LSM4-204ENST00000594828 NRGNQ92686 78 aa21.23■□□□□ 0.99
LSM4-204ENST00000594828 GIMAP5Q96F15 307 aa21.23■□□□□ 0.99
LSM4-204ENST00000594828 MS4A4EQ96PG1 132 aa21.23■□□□□ 0.99
LSM4-204ENST00000594828 GPATCH1Q9BRR8 931 aaKnown RBP21.23■□□□□ 0.99
LSM4-204ENST00000594828 TMEM109Q9BVC6 243 aa21.23■□□□□ 0.99
LSM4-204ENST00000594828 RASSF1Q9NS23 344 aa21.23■□□□□ 0.99
LSM4-204ENST00000594828 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.23■□□□□ 0.99
LSM4-204ENST00000594828 ATP6V1HQ9UI12 483 aa21.23■□□□□ 0.99
LSM4-204ENST00000594828 ZDHHC2Q9UIJ5 367 aa21.23■□□□□ 0.99
LSM4-204ENST00000594828 V9GYY5 206 aaPredicted RBP21.23■□□□□ 0.99
LSM4-204ENST00000594828 DOCK7Q96N67 2140 aa21.23■□□□□ 0.99
LSM4-204ENST00000594828 LINC01387J3KSC0 135 aa21.22■□□□□ 0.99
LSM4-204ENST00000594828 TYROBPO43914 113 aa21.22■□□□□ 0.99
LSM4-204ENST00000594828 EFNA1P20827 205 aaPredicted RBP21.22■□□□□ 0.99
LSM4-204ENST00000594828 DNAJA1P31689 397 aaKnown RBP21.22■□□□□ 0.99
LSM4-204ENST00000594828 ARRB2P32121 409 aa21.22■□□□□ 0.99
LSM4-204ENST00000594828 HPCAL1P37235 193 aa21.22■□□□□ 0.99
LSM4-204ENST00000594828 RPL3P39023 403 aaKnown RBP21.22■□□□□ 0.99
LSM4-204ENST00000594828 EEF1A1P68104 462 aaKnown RBP21.22■□□□□ 0.99
LSM4-204ENST00000594828 MLC1Q15049 377 aa21.22■□□□□ 0.99
LSM4-204ENST00000594828 ATP6AP1LQ52LC2 224 aa21.22■□□□□ 0.99
LSM4-204ENST00000594828 EEF1A1P5Q5VTE0 462 aa21.22■□□□□ 0.99
LSM4-204ENST00000594828 ZCCHC12Q6PEW1 402 aa21.22■□□□□ 0.99
LSM4-204ENST00000594828 APOOLQ6UXV4 268 aa21.22■□□□□ 0.99
LSM4-204ENST00000594828 GCNT2Q8N0V5 402 aa21.22■□□□□ 0.99
LSM4-204ENST00000594828 MEIOBQ8N635 442 aa21.22■□□□□ 0.99
LSM4-204ENST00000594828 SLC16A11Q8NCK7 471 aa21.22■□□□□ 0.99
LSM4-204ENST00000594828 GOT1L1Q8NHS2 421 aaPredicted RBP21.22■□□□□ 0.99
LSM4-204ENST00000594828 C1GALT1C1Q96EU7 318 aa21.22■□□□□ 0.99
LSM4-204ENST00000594828 C3orf30Q96M34 536 aa21.22■□□□□ 0.99
LSM4-204ENST00000594828 CLEC4MQ9H2X3 399 aaPredicted RBP21.22■□□□□ 0.99
LSM4-204ENST00000594828 ZNF337Q9Y3M9 751 aa21.22■□□□□ 0.99
LSM4-204ENST00000594828 AKAP9Q99996 3911 aa21.22■□□□□ 0.99
LSM4-204ENST00000594828 FAM221AA4D161 298 aa21.21■□□□□ 0.99
LSM4-204ENST00000594828 A6NNC1 897 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms