RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 ADAMTS15Q8TE58 950 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 SSC4DQ8WTU2 575 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 CHMP6Q96FZ7 201 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 GNRHR2Q96P88 292 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 EBF4Q9BQW3 602 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 YIPF4Q9BSR8 244 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 BTBD2Q9BX70 525 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 LDAHQ9H6V9 325 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 HHATLQ9HCP6 504 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 SETXQ7Z333 2677 aaKnown RBP10.87□□□□□ -0.67
LIG3-213ENST00000590630 PCNX3Q9H6A9 2034 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 TRGV5A0A0B4J1U4 118 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 WIPF3A6NGB9 483 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 DUXAA6NLW8 204 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 C9JVG2 144 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 GNB5O14775 395 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 BCKDKO14874 412 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 FADS1O60427 444 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 CBR3O75828 277 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 UTS2O95399 124 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 LDLRP01130 860 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 IGKV1D-16P01601 117 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 HPNP05981 417 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 NGFRP08138 427 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 MAN2A2P49641 1150 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 GAS1P54826 345 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 POU6F2P78424 691 aaPredicted RBP10.86□□□□□ -0.67
LIG3-213ENST00000590630 C3AR1Q16581 482 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 MSANTD1Q6ZTZ1 278 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 C6orf120Q7Z4R8 191 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 FJX1Q86VR8 437 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 PLCZ1Q86YW0 608 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 EID3Q8N140 333 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 WDSUB1Q8N9V3 476 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 NEIL3Q8TAT5 605 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 MIPOL1Q8TD10 442 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 CDS1Q92903 461 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 PANX1Q96RD7 426 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 TBL1XR1Q9BZK7 514 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 EXO5Q9H790 373 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 SDHAF3Q9NRP4 125 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 TMEM45AQ9NWC5 275 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 TINAGQ9UJW2 476 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 LIPGQ9Y5X9 500 aa10.86□□□□□ -0.67
LIG3-213ENST00000590630 NCOA6Q14686 2063 aaPredicted RBP10.86□□□□□ -0.67
LIG3-213ENST00000590630 ARHGAP21Q5T5U3 1957 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 MED12Q93074 2177 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 FAM234BA2RU67 622 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 C2orf72A6NCS6 295 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 CCL21O00585 134 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 SCO2O43819 266 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 TRAPPC6AO75865 159 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 CPSF4O95639 269 aaKnown RBP10.85□□□□□ -0.67
LIG3-213ENST00000590630 AGR2O95994 175 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 TPOP07202 933 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 ATP6V1C1P21283 382 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 TBXA2RP21731 343 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 MATN1P21941 496 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 CHI3L1P36222 383 aaPredicted RBP10.85□□□□□ -0.67
LIG3-213ENST00000590630 ZFP36L2P47974 494 aaKnown RBP10.85□□□□□ -0.67
LIG3-213ENST00000590630 POLR2JP52435 117 aaKnown RBP10.85□□□□□ -0.67
LIG3-213ENST00000590630 TOMM20Q15388 145 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 GRAMD1BQ3KR37 738 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 SAXO2Q658L1 398 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 FIGNL1Q6PIW4 674 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 DOLPP1Q86YN1 238 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 OR9I1Q8NGQ6 314 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 SARAFQ96BY9 339 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 NEURL3Q96EH8 262 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 OTUB1Q96FW1 271 aaPredicted RBP10.85□□□□□ -0.67
LIG3-213ENST00000590630 SLC35G5Q96KT7 338 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 OR7D2Q96RA2 312 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 SLC35A5Q9BS91 424 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 CCDC134Q9H6E4 229 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 RMND5AQ9H871 391 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 NPHS2Q9NP85 383 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 SERHLQ9NQF3 203 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 UBQLN4Q9NRR5 601 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 FLRT3Q9NZU0 649 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 PPP4R1LQ9P1A2 415 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 SUCOQ9UBS9 1254 aaKnown RBP10.85□□□□□ -0.67
LIG3-213ENST00000590630 SH3BGRL2Q9UJC5 107 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 TRIM33Q9UPN9 1127 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 CRYBG3Q68DQ2 2970 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 ADGRG4Q8IZF6 3080 aa10.85□□□□□ -0.67
LIG3-213ENST00000590630 CCDC154A6NI56 674 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 ALG1L2C9J202 215 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 NPIPA2E9PIF3 369 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 E9PLN8 166 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 NPIPA3F8WFD2 350 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 RFXANKO14593 260 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 ADAM10O14672 748 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 ZNHIT1O43257 154 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 OXSR1O95747 527 aaPredicted RBP10.84□□□□□ -0.67
LIG3-213ENST00000590630 AK1P00568 194 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 ESRRAP11474 423 aaPredicted RBP10.84□□□□□ -0.67
LIG3-213ENST00000590630 HPGDP15428 266 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 ENDOUP21128 410 aaKnown RBP10.84□□□□□ -0.67
LIG3-213ENST00000590630 GCKP35557 465 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 ATP4BP51164 291 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms