RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 TAS2R9Q9NYW1 312 aa16.55■□□□□ 0.24
CCDC43-204ENST00000588687 A0A087WV62 115 aa16.54■□□□□ 0.24
CCDC43-204ENST00000588687 IGLV3-32A0A0A0MS00 114 aa16.54■□□□□ 0.24
CCDC43-204ENST00000588687 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.54■□□□□ 0.24
CCDC43-204ENST00000588687 GNG14A0A1W2PPG7 69 aa16.54■□□□□ 0.24
CCDC43-204ENST00000588687 TRIM49D1C9J1S8 452 aa16.54■□□□□ 0.24
CCDC43-204ENST00000588687 KLF4O43474 513 aa16.54■□□□□ 0.24
CCDC43-204ENST00000588687 KRT6AP02538 564 aa16.54■□□□□ 0.24
CCDC43-204ENST00000588687 KRT6BP04259 564 aa16.54■□□□□ 0.24
CCDC43-204ENST00000588687 ECHS1P30084 290 aa16.54■□□□□ 0.24
CCDC43-204ENST00000588687 SLC6A8P48029 635 aa16.54■□□□□ 0.24
CCDC43-204ENST00000588687 KRT6CP48668 564 aa16.54■□□□□ 0.24
CCDC43-204ENST00000588687 STX5Q13190 355 aa16.54■□□□□ 0.24
CCDC43-204ENST00000588687 FGFBP1Q14512 234 aa16.54■□□□□ 0.24
CCDC43-204ENST00000588687 HEPACAMQ14CZ8 416 aa16.54■□□□□ 0.24
CCDC43-204ENST00000588687 CYP27C1Q4G0S4 372 aa16.54■□□□□ 0.24
CCDC43-204ENST00000588687 FAM214BQ7L5A3 538 aa16.54■□□□□ 0.24
CCDC43-204ENST00000588687 CHMP1BQ7LBR1 199 aa16.54■□□□□ 0.24
CCDC43-204ENST00000588687 UHMK1Q8TAS1 419 aaKnown RBP16.54■□□□□ 0.24
CCDC43-204ENST00000588687 SHCBP1LQ9BZQ2 653 aa16.54■□□□□ 0.24
CCDC43-204ENST00000588687 ZNF701Q9NV72 531 aaPredicted RBP16.54■□□□□ 0.24
CCDC43-204ENST00000588687 C19orf53Q9UNZ5 99 aaPredicted RBP16.54■□□□□ 0.24
CCDC43-204ENST00000588687 OR10H1Q9Y4A9 318 aa16.54■□□□□ 0.24
CCDC43-204ENST00000588687 H3BML4 177 aa16.53■□□□□ 0.24
CCDC43-204ENST00000588687 LINC01387J3KSC0 135 aa16.53■□□□□ 0.24
CCDC43-204ENST00000588687 UPK1AO00322 258 aa16.53■□□□□ 0.24
CCDC43-204ENST00000588687 COQ9O75208 318 aa16.53■□□□□ 0.24
CCDC43-204ENST00000588687 CNOT4O95628 575 aaKnown RBP16.53■□□□□ 0.24
CCDC43-204ENST00000588687 DDCP20711 480 aa16.53■□□□□ 0.24
CCDC43-204ENST00000588687 EEFSECP57772 596 aaKnown RBP16.53■□□□□ 0.24
CCDC43-204ENST00000588687 ACSM2AQ08AH3 577 aa16.53■□□□□ 0.24
CCDC43-204ENST00000588687 ACSM2BQ68CK6 577 aa16.53■□□□□ 0.24
CCDC43-204ENST00000588687 ANKRD34AQ69YU3 496 aa16.53■□□□□ 0.24
CCDC43-204ENST00000588687 C8orf74Q6P047 294 aa16.53■□□□□ 0.24
CCDC43-204ENST00000588687 APOOLQ6UXV4 268 aa16.53■□□□□ 0.24
CCDC43-204ENST00000588687 GPRIN3Q6ZVF9 776 aa16.53■□□□□ 0.24
CCDC43-204ENST00000588687 OR2L13Q8N349 312 aa16.53■□□□□ 0.24
CCDC43-204ENST00000588687 KCNA7Q96RP8 456 aa16.53■□□□□ 0.24
CCDC43-204ENST00000588687 GIMAP4Q9NUV9 329 aa16.53■□□□□ 0.24
CCDC43-204ENST00000588687 PROCRQ9UNN8 238 aa16.53■□□□□ 0.24
CCDC43-204ENST00000588687 RTTNQ86VV8 2226 aa16.53■□□□□ 0.24
CCDC43-204ENST00000588687 SHISA8B8ZZ34 492 aa16.52■□□□□ 0.24
CCDC43-204ENST00000588687 DLX3O60479 287 aa16.52■□□□□ 0.24
CCDC43-204ENST00000588687 ULK1O75385 1050 aa16.52■□□□□ 0.24
CCDC43-204ENST00000588687 SUPT7LO94864 414 aa16.52■□□□□ 0.24
CCDC43-204ENST00000588687 IL33O95760 270 aa16.52■□□□□ 0.24
CCDC43-204ENST00000588687 JUNP05412 331 aaKnown RBP16.52■□□□□ 0.24
CCDC43-204ENST00000588687 CASQ1P31415 396 aa16.52■□□□□ 0.24
CCDC43-204ENST00000588687 MPIP34949 423 aa16.52■□□□□ 0.24
CCDC43-204ENST00000588687 GSTM5P46439 218 aa16.52■□□□□ 0.24
CCDC43-204ENST00000588687 ETF1P62495 437 aaKnown RBP16.52■□□□□ 0.24
CCDC43-204ENST00000588687 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.52■□□□□ 0.24
CCDC43-204ENST00000588687 CTU2Q2VPK5 515 aaKnown RBP16.52■□□□□ 0.24
CCDC43-204ENST00000588687 GLYR1Q49A26 553 aaPredicted RBP16.52■□□□□ 0.24
CCDC43-204ENST00000588687 TMEM107Q6UX40 140 aa16.52■□□□□ 0.24
CCDC43-204ENST00000588687 STAC2Q6ZMT1 411 aa16.52■□□□□ 0.24
CCDC43-204ENST00000588687 MARCH3Q86UD3 253 aa16.52■□□□□ 0.24
CCDC43-204ENST00000588687 C17orf53Q8N3J3 647 aaPredicted RBP16.52■□□□□ 0.24
CCDC43-204ENST00000588687 METTL6Q8TCB7 284 aa16.52■□□□□ 0.24
CCDC43-204ENST00000588687 ADGRG7Q96K78 797 aa16.52■□□□□ 0.24
CCDC43-204ENST00000588687 TMEM204Q9BSN7 226 aa16.52■□□□□ 0.24
CCDC43-204ENST00000588687 LMF2Q9BU23 707 aaKnown RBP16.52■□□□□ 0.24
CCDC43-204ENST00000588687 TAS2R7Q9NYW3 318 aa16.52■□□□□ 0.24
CCDC43-204ENST00000588687 TMEM216Q9P0N5 145 aa16.52■□□□□ 0.24
CCDC43-204ENST00000588687 SENP1Q9P0U3 644 aa16.52■□□□□ 0.24
CCDC43-204ENST00000588687 DMGDHQ9UI17 866 aaKnown RBP16.52■□□□□ 0.24
CCDC43-204ENST00000588687 AP4B1Q9Y6B7 739 aa16.52■□□□□ 0.24
CCDC43-204ENST00000588687 SERTM1A2A2V5 107 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 SS18L1O75177 396 aaPredicted RBP16.51■□□□□ 0.23
CCDC43-204ENST00000588687 SLITRK5O94991 958 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 SOX30O94993 753 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 IGKV1D-16P01601 117 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 FCGR2AP12318 317 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 TBXA2RP21731 343 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 GCAP28676 217 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 KCNJ5P48544 419 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 ZNF763Q0D2J5 394 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 BEX5Q5H9J7 111 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 SH2D4BQ5SQS7 431 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 FAM71E1Q6IPT2 247 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 SYT10Q6XYQ8 523 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 ZNF704Q6ZNC4 412 aaPredicted RBP16.51■□□□□ 0.23
CCDC43-204ENST00000588687 OR6K3Q8NGY3 331 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 DUSP19Q8WTR2 217 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 HOXB13Q92826 284 aaPredicted RBP16.51■□□□□ 0.23
CCDC43-204ENST00000588687 NPAS1Q99742 590 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 KLHL4Q9C0H6 718 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 GLIPR2Q9H4G4 154 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 PLSCR4Q9NRQ2 329 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 TIMM22Q9Y584 194 aa16.51■□□□□ 0.23
CCDC43-204ENST00000588687 CR1P17927 2039 aa16.5■□□□□ 0.23
CCDC43-204ENST00000588687 CHD3Q12873 2000 aaKnown RBP16.5■□□□□ 0.23
CCDC43-204ENST00000588687 PLAUP00749 431 aa16.5■□□□□ 0.23
CCDC43-204ENST00000588687 ANXA4P09525 319 aaPredicted RBP16.5■□□□□ 0.23
CCDC43-204ENST00000588687 HMOX2P30519 316 aa16.5■□□□□ 0.23
CCDC43-204ENST00000588687 MAP3K8P41279 467 aa16.5■□□□□ 0.23
CCDC43-204ENST00000588687 NCBP2P52298 156 aaKnown RBP eCLIP16.5■□□□□ 0.23
CCDC43-204ENST00000588687 FOXA1P55317 472 aa16.5■□□□□ 0.23
CCDC43-204ENST00000588687 PRR5P85299 388 aa16.5■□□□□ 0.23
CCDC43-204ENST00000588687 LCP2Q13094 533 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms