RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 UBQLN3Q9H347 655 aa18.46■□□□□ 0.55
DDX39A-207ENST00000588542 CCDC167Q9P0B6 97 aa18.46■□□□□ 0.55
DDX39A-207ENST00000588542 LIPGQ9Y5X9 500 aa18.46■□□□□ 0.55
DDX39A-207ENST00000588542 CLEC18AA5D8T8 446 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 C17orf51A8MQB3 221 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 B4DXG7 233 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 RFXANKO14593 260 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 SNPHO15079 494 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 PDE9AO76083 593 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 IGHG3P01860 377 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 PTPN6P29350 595 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 MASP1P48740 699 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 CASP9P55211 416 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 GRAMD1BQ3KR37 738 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 AGKQ53H12 422 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 CLEC18BQ6UXF7 455 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 APOOLQ6UXV4 268 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 ZNF621Q6ZSS3 439 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 WDSUB1Q8N9V3 476 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 CLEC18CQ8NCF0 446 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 GTF2H4Q92759 462 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 TMEM45AQ9NWC5 275 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 QPCTLQ9NXS2 382 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 ABCG2Q9UNQ0 655 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 OSGIN2Q9Y236 505 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 ZNF835Q9Y2P0 537 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 C15orf41Q9Y2V0 281 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 WIF1Q9Y5W5 379 aa18.45■□□□□ 0.54
DDX39A-207ENST00000588542 CDC40O60508 579 aaKnown RBP eCLIP18.44■□□□□ 0.54
DDX39A-207ENST00000588542 SOX30O94993 753 aa18.44■□□□□ 0.54
DDX39A-207ENST00000588542 STSP08842 583 aa18.44■□□□□ 0.54
DDX39A-207ENST00000588542 CAPN3P20807 821 aa18.44■□□□□ 0.54
DDX39A-207ENST00000588542 ARFIP2P53365 341 aa18.44■□□□□ 0.54
DDX39A-207ENST00000588542 SLC10A1Q14973 349 aa18.44■□□□□ 0.54
DDX39A-207ENST00000588542 DCST2Q5T1A1 773 aa18.44■□□□□ 0.54
DDX39A-207ENST00000588542 METTL21CQ5VZV1 264 aa18.44■□□□□ 0.54
DDX39A-207ENST00000588542 SLC2A7Q6PXP3 512 aa18.44■□□□□ 0.54
DDX39A-207ENST00000588542 OR1J4Q8NGS1 313 aa18.44■□□□□ 0.54
DDX39A-207ENST00000588542 OR4C3Q8NH37 302 aa18.44■□□□□ 0.54
DDX39A-207ENST00000588542 SPDL1Q96EA4 605 aa18.44■□□□□ 0.54
DDX39A-207ENST00000588542 ITCHQ96J02 903 aa18.44■□□□□ 0.54
DDX39A-207ENST00000588542 PHF12Q96QT6 1004 aa18.44■□□□□ 0.54
DDX39A-207ENST00000588542 OR51I1Q9H343 314 aa18.44■□□□□ 0.54
DDX39A-207ENST00000588542 RMND5AQ9H871 391 aa18.44■□□□□ 0.54
DDX39A-207ENST00000588542 TRIM33Q9UPN9 1127 aa18.44■□□□□ 0.54
DDX39A-207ENST00000588542 A0A1B0GTH9 108 aa18.43■□□□□ 0.54
DDX39A-207ENST00000588542 NR5A2O00482 541 aa18.43■□□□□ 0.54
DDX39A-207ENST00000588542 SCO2O43819 266 aa18.43■□□□□ 0.54
DDX39A-207ENST00000588542 NGFRP08138 427 aa18.43■□□□□ 0.54
DDX39A-207ENST00000588542 ZCCHC18P0CG32 403 aa18.43■□□□□ 0.54
DDX39A-207ENST00000588542 HOXB9P17482 250 aaPredicted RBP18.43■□□□□ 0.54
DDX39A-207ENST00000588542 ELAVL4P26378 380 aaKnown RBP18.43■□□□□ 0.54
DDX39A-207ENST00000588542 GDF1P27539 372 aa18.43■□□□□ 0.54
DDX39A-207ENST00000588542 LCN1P31025 176 aa18.43■□□□□ 0.54
DDX39A-207ENST00000588542 CHI3L1P36222 383 aaPredicted RBP18.43■□□□□ 0.54
DDX39A-207ENST00000588542 TRPC1P48995 793 aa18.43■□□□□ 0.54
DDX39A-207ENST00000588542 GTDC1Q4AE62 458 aa18.43■□□□□ 0.54
DDX39A-207ENST00000588542 DNAJC14Q6Y2X3 702 aaPredicted RBP18.43■□□□□ 0.54
DDX39A-207ENST00000588542 Q6ZPB1 254 aaPredicted RBP18.43■□□□□ 0.54
DDX39A-207ENST00000588542 TRILQ7L0X0 811 aa18.43■□□□□ 0.54
DDX39A-207ENST00000588542 TRIML2Q8N7C3 387 aa18.43■□□□□ 0.54
DDX39A-207ENST00000588542 CHDHQ8NE62 594 aaPredicted RBP18.43■□□□□ 0.54
DDX39A-207ENST00000588542 ZFP90Q8TF47 636 aa18.43■□□□□ 0.54
DDX39A-207ENST00000588542 G6PC3Q9BUM1 346 aa18.43■□□□□ 0.54
DDX39A-207ENST00000588542 PAIP1Q9H074 479 aaKnown RBP18.43■□□□□ 0.54
DDX39A-207ENST00000588542 ACKR4Q9NPB9 350 aa18.43■□□□□ 0.54
DDX39A-207ENST00000588542 KLHL14Q9P2G3 628 aa18.43■□□□□ 0.54
DDX39A-207ENST00000588542 B4GALT7Q9UBV7 327 aa18.43■□□□□ 0.54
DDX39A-207ENST00000588542 PCDHGB3Q9Y5G1 929 aa18.43■□□□□ 0.54
DDX39A-207ENST00000588542 A0A1B0GVC2 190 aa18.42■□□□□ 0.54
DDX39A-207ENST00000588542 DUXAA6NLW8 204 aa18.42■□□□□ 0.54
DDX39A-207ENST00000588542 SLC19A2O60779 497 aa18.42■□□□□ 0.54
DDX39A-207ENST00000588542 OXSR1O95747 527 aaPredicted RBP18.42■□□□□ 0.54
DDX39A-207ENST00000588542 OR12D1P0DN82 309 aa18.42■□□□□ 0.54
DDX39A-207ENST00000588542 TBXA2RP21731 343 aa18.42■□□□□ 0.54
DDX39A-207ENST00000588542 GYS2P54840 703 aa18.42■□□□□ 0.54
DDX39A-207ENST00000588542 RBPJQ06330 500 aa18.42■□□□□ 0.54
DDX39A-207ENST00000588542 OR5M10Q6IEU7 315 aa18.42■□□□□ 0.54
DDX39A-207ENST00000588542 HEPHL1Q6MZM0 1159 aa18.42■□□□□ 0.54
DDX39A-207ENST00000588542 TNFAIP8L2Q6P589 184 aaPredicted RBP18.42■□□□□ 0.54
DDX39A-207ENST00000588542 MYO7BQ6PIF6 2116 aa18.42■□□□□ 0.54
DDX39A-207ENST00000588542 MARCH3Q86UD3 253 aa18.42■□□□□ 0.54
DDX39A-207ENST00000588542 RNF130Q86XS8 419 aa18.42■□□□□ 0.54
DDX39A-207ENST00000588542 PLCZ1Q86YW0 608 aa18.42■□□□□ 0.54
DDX39A-207ENST00000588542 SPPL2CQ8IUH8 684 aa18.42■□□□□ 0.54
DDX39A-207ENST00000588542 RAB8BQ92930 207 aa18.42■□□□□ 0.54
DDX39A-207ENST00000588542 SDF2Q99470 211 aa18.42■□□□□ 0.54
DDX39A-207ENST00000588542 RABEP2Q9H5N1 569 aa18.42■□□□□ 0.54
DDX39A-207ENST00000588542 MED12Q93074 2177 aa18.42■□□□□ 0.54
DDX39A-207ENST00000588542 LRRK2Q5S007 2527 aa18.41■□□□□ 0.54
DDX39A-207ENST00000588542 PRAMEF27A3QJZ7 478 aa18.41■□□□□ 0.54
DDX39A-207ENST00000588542 SUSD5O60279 629 aa18.41■□□□□ 0.54
DDX39A-207ENST00000588542 SEMA7AO75326 666 aa18.41■□□□□ 0.54
DDX39A-207ENST00000588542 HPNP05981 417 aa18.41■□□□□ 0.54
DDX39A-207ENST00000588542 ENDOUP21128 410 aaKnown RBP18.41■□□□□ 0.54
DDX39A-207ENST00000588542 MVDP53602 400 aa18.41■□□□□ 0.54
DDX39A-207ENST00000588542 ARHGAP11BQ3KRB8 267 aa18.41■□□□□ 0.54
DDX39A-207ENST00000588542 PAGE3Q5JUK9 113 aa18.41■□□□□ 0.54
DDX39A-207ENST00000588542 COX20Q5RI15 118 aa18.41■□□□□ 0.54
DDX39A-207ENST00000588542 C6orf10Q5SRN2 563 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms