RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 CCDC189A1A4V9 331 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 HAX1O00165 279 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 GMFGO60234 142 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 SS18L1O75177 396 aaPredicted RBP13.65□□□□□ -0.22
IFT20-216ENST00000588477 KLHL2O95198 593 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 CD3EP07766 207 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 PSMB1P20618 241 aaKnown RBP13.65□□□□□ -0.22
IFT20-216ENST00000588477 TRA2BP62995 288 aaKnown RBP13.65□□□□□ -0.22
IFT20-216ENST00000588477 PSG6Q00889 435 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 ZNF844Q08AG5 666 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.65□□□□□ -0.22
IFT20-216ENST00000588477 GLYR1Q49A26 553 aaPredicted RBP13.65□□□□□ -0.22
IFT20-216ENST00000588477 NCMAPQ5T1S8 102 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 MROH9Q5TGP6 573 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 KLC3Q6P597 504 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 MARCH3Q86UD3 253 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 STK32CQ86UX6 486 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 CREG2Q8IUH2 290 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 C1orf52Q8N6N3 182 aaKnown RBP13.65□□□□□ -0.22
IFT20-216ENST00000588477 PTGR2Q8N8N7 351 aaPredicted RBP13.65□□□□□ -0.22
IFT20-216ENST00000588477 OR4F6Q8NGB9 312 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 FBF1Q8TES7 1133 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 EXOSC8Q96B26 276 aaKnown RBP13.65□□□□□ -0.22
IFT20-216ENST00000588477 S100PBPQ96BU1 408 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 ERP27Q96DN0 273 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 MTBPQ96DY7 904 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 DPH5Q9H2P9 285 aa13.65□□□□□ -0.22
IFT20-216ENST00000588477 CCDC188H7C350 402 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 THBS1P07996 1170 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 CALCOCO2Q13137 446 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 TSC22D1Q15714 1073 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 C6orf52Q5T4I8 152 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 FAM219BQ5XKK7 198 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 RPS27LQ71UM5 84 aaKnown RBP13.64□□□□□ -0.23
IFT20-216ENST00000588477 CCDC91Q7Z6B0 441 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 STEAP2Q8NFT2 490 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 OR7G2Q8NG99 324 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 OR10D3Q8NH80 312 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 SELENOMQ8WWX9 145 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 MRRFQ96E11 262 aaKnown RBP13.64□□□□□ -0.23
IFT20-216ENST00000588477 HS6ST2Q96MM7 605 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 GPR78Q96P69 363 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 ESRP2Q9H6T0 727 aaKnown RBP13.64□□□□□ -0.23
IFT20-216ENST00000588477 SENP1Q9P0U3 644 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 STOML1Q9UBI4 398 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 CDC42EP3Q9UKI2 254 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 PCTPQ9UKL6 214 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 MCTS1Q9ULC4 181 aaKnown RBP13.64□□□□□ -0.23
IFT20-216ENST00000588477 ABCG2Q9UNQ0 655 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 VDAC3Q9Y277 283 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 MALRD1Q5VYJ5 2156 aa13.64□□□□□ -0.23
IFT20-216ENST00000588477 A0A096LPK6 155 aa13.63□□□□□ -0.23
IFT20-216ENST00000588477 SSX4O60224 188 aa13.63□□□□□ -0.23
IFT20-216ENST00000588477 PLOD3O60568 738 aa13.63□□□□□ -0.23
IFT20-216ENST00000588477 OPN1LWP04000 364 aa13.63□□□□□ -0.23
IFT20-216ENST00000588477 IL3P08700 152 aa13.63□□□□□ -0.23
IFT20-216ENST00000588477 CLK3P49761 638 aaKnown RBP13.63□□□□□ -0.23
IFT20-216ENST00000588477 ZNF155Q12901 538 aaPredicted RBP13.63□□□□□ -0.23
IFT20-216ENST00000588477 PGGHGQ32M88 737 aa13.63□□□□□ -0.23
IFT20-216ENST00000588477 ZNF672Q499Z4 452 aaPredicted RBP13.63□□□□□ -0.23
IFT20-216ENST00000588477 GGTA1PQ4G0N0 100 aa13.63□□□□□ -0.23
IFT20-216ENST00000588477 TECRLQ5HYJ1 363 aa13.63□□□□□ -0.23
IFT20-216ENST00000588477 MFSD12Q6NUT3 480 aa13.63□□□□□ -0.23
IFT20-216ENST00000588477 ATG4DQ86TL0 474 aaPredicted RBP13.63□□□□□ -0.23
IFT20-216ENST00000588477 KBTBD8Q8NFY9 601 aa13.63□□□□□ -0.23
IFT20-216ENST00000588477 HBEGFQ99075 208 aa13.63□□□□□ -0.23
IFT20-216ENST00000588477 RHNO1Q9BSD3 238 aa13.63□□□□□ -0.23
IFT20-216ENST00000588477 BEX2Q9BXY8 128 aa13.63□□□□□ -0.23
IFT20-216ENST00000588477 ALG2Q9H553 416 aa13.63□□□□□ -0.23
IFT20-216ENST00000588477 BRF2Q9HAW0 419 aa13.63□□□□□ -0.23
IFT20-216ENST00000588477 GLRX2Q9NS18 164 aa13.63□□□□□ -0.23
IFT20-216ENST00000588477 FBXO34Q9NWN3 711 aa13.63□□□□□ -0.23
IFT20-216ENST00000588477 HEATR1Q9H583 2144 aaKnown RBP13.63□□□□□ -0.23
IFT20-216ENST00000588477 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.62□□□□□ -0.234e-10■■■■□ 20.9
IFT20-216ENST00000588477 HMX2A2RU54 273 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 CXCL13O43927 109 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 SYNGR4O95473 234 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 STX2P32856 288 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 RFX3P48380 749 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 C17orf67Q0P5P2 114 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 TAB1Q15750 504 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 DECR1Q16698 335 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 TMEM44Q2T9K0 475 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 CYP27C1Q4G0S4 372 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 FIGNL1Q6PIW4 674 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 FAM9CQ8IZT9 166 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 PLD6Q8N2A8 252 aaKnown RBP13.62□□□□□ -0.23
IFT20-216ENST00000588477 ZNF619Q8N2I2 560 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 C11orf24Q96F05 449 aaPredicted RBP13.62□□□□□ -0.23
IFT20-216ENST00000588477 KCNK17Q96T54 332 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 HDHD5Q9BXW7 423 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 AMBRA1Q9C0C7 1298 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 BARX1Q9HBU1 254 aaPredicted RBP13.62□□□□□ -0.23
IFT20-216ENST00000588477 NGBQ9NPG2 151 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 GIMAP4Q9NUV9 329 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 NMRK1Q9NWW6 199 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 FAM120CQ9NX05 1096 aaKnown RBP13.62□□□□□ -0.23
IFT20-216ENST00000588477 PAQR5Q9NXK6 330 aaPredicted RBP13.62□□□□□ -0.23
IFT20-216ENST00000588477 XPR1Q9UBH6 696 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 MCM8Q9UJA3 840 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms