RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 GALNT10Q86SR1 603 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 MARCH3Q86UD3 253 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 CXorf67Q86X51 503 aaPredicted RBP12.36□□□□□ -0.43
HDAC5-208ENST00000588419 CEP112Q8N8E3 955 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 FADS6Q8N9I5 356 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 FBXO30Q8TB52 745 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 Q96MF0 132 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 PIGQQ9BRB3 760 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 PRRG4Q9BZD6 226 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 TBL1XR1Q9BZK7 514 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 SHCBP1LQ9BZQ2 653 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 RTN4RQ9BZR6 473 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 GSTO2Q9H4Y5 243 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 PROCRQ9UNN8 238 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 VDAC3Q9Y277 283 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 MRPS18CQ9Y3D5 142 aaKnown RBP12.36□□□□□ -0.43
HDAC5-208ENST00000588419 ZNF337Q9Y3M9 751 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 OR2M5A3KFT3 312 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 MYO1GB0I1T2 1018 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 H7C1Q1 480 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 EIF1AYO14602 144 aaKnown RBP12.35□□□□□ -0.43
HDAC5-208ENST00000588419 CRHP06850 196 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 GSTA1P08263 222 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 PYGBP11216 843 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 GPC1P35052 558 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 UGT2B10P36537 528 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 KIR2DL2P43627 348 aaPredicted RBP12.35□□□□□ -0.43
HDAC5-208ENST00000588419 PRKAA2P54646 552 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 CLDN20P56880 219 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 RPS3AP61247 264 aaKnown RBP12.35□□□□□ -0.43
HDAC5-208ENST00000588419 BCL2A1Q16548 175 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 ZNF610Q8N9Z0 462 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 GATSQ8NAP1 163 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 MNS1Q8NEH6 495 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 DUSP19Q8WTR2 217 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 SLC9A6Q92581 669 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 GFM2Q969S9 779 aaKnown RBP12.35□□□□□ -0.43
HDAC5-208ENST00000588419 L3HYPDHQ96EM0 354 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 SLC39A3Q9BRY0 314 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 GLIPR2Q9H4G4 154 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 MRTO4Q9UKD2 239 aaKnown RBP12.35□□□□□ -0.43
HDAC5-208ENST00000588419 CLEC4AQ9UMR7 237 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 ABCG2Q9UNQ0 655 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 FIS1Q9Y3D6 152 aa12.35□□□□□ -0.43
HDAC5-208ENST00000588419 GXYLT2A0PJZ3 443 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 DEFB108AA8MXU0 73 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 UPK1AO00322 258 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 FADS1O60427 444 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 UTS2O95399 124 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 PLGP00747 810 aaPredicted RBP12.34□□□□□ -0.43
HDAC5-208ENST00000588419 MYL2P10916 166 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 CRYGSP22914 178 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 GABRA3P34903 492 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 GSTM5P46439 218 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 EIF1AXP47813 144 aaKnown RBP12.34□□□□□ -0.43
HDAC5-208ENST00000588419 PRKAG1P54619 331 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 PSMD4P55036 377 aaKnown RBP12.34□□□□□ -0.43
HDAC5-208ENST00000588419 CLDN15P56746 228 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 GRAMD1BQ3KR37 738 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 CYP27C1Q4G0S4 372 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 ALKBH2Q6NS38 261 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 ANKRD26P1Q6NSI1 321 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 TIFABQ6ZNK6 161 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 YTHDF3Q7Z739 585 aaKnown RBP12.34□□□□□ -0.43
HDAC5-208ENST00000588419 CIARTQ8N365 385 aaPredicted RBP12.34□□□□□ -0.43
HDAC5-208ENST00000588419 CCDC63Q8NA47 563 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 RNF138Q8WVD3 245 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 PIK3R3Q92569 461 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 PIGTQ969N2 578 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 C1GALT1C1Q96EU7 318 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 HS3ST6Q96QI5 342 aa12.34□□□□□ -0.43
HDAC5-208ENST00000588419 FAM120CQ9NX05 1096 aaKnown RBP12.34□□□□□ -0.43
HDAC5-208ENST00000588419 C19orf53Q9UNZ5 99 aaPredicted RBP12.34□□□□□ -0.43
HDAC5-208ENST00000588419 A0A087WV62 115 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 C16orf97H3BN30 126 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 UBFD1O14562 309 aaKnown RBP12.33□□□□□ -0.44
HDAC5-208ENST00000588419 RIPK2O43353 540 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 TNFRSF21O75509 655 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 KCNH1O95259 989 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 IL33O95760 270 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 ANGPTL1O95841 491 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 LY6G6DO95868 133 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 OPN1LWP04000 364 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 HEXAP06865 529 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 ABHD2P08910 425 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 FPR1P21462 350 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 PCSK6P29122 969 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 ACKR1Q16570 336 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 CFAP157Q5JU67 520 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 FAM71E1Q6IPT2 247 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 GALNT18Q6P9A2 607 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 ZNF551Q7Z340 670 aaPredicted RBP12.33□□□□□ -0.44
HDAC5-208ENST00000588419 GPR151Q8TDV0 419 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 NUDT8Q8WV74 236 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 CIDECQ96AQ7 238 aaPredicted RBP12.33□□□□□ -0.44
HDAC5-208ENST00000588419 OTUB1Q96FW1 271 aaPredicted RBP12.33□□□□□ -0.44
HDAC5-208ENST00000588419 AMDHD1Q96NU7 426 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 RNF122Q9H9V4 155 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 C3orf14Q9HBI5 128 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 MYNNQ9NPC7 610 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms