RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 NSL1Q96IY1 281 aa9.78□□□□□ -0.84
CSNK1D-226ENST00000585026 PIP5K1AQ99755 562 aa9.78□□□□□ -0.84
CSNK1D-226ENST00000585026 SORBS1Q9BX66 1292 aaKnown RBP9.78□□□□□ -0.84
CSNK1D-226ENST00000585026 MPDZO75970 2070 aa9.78□□□□□ -0.84
CSNK1D-226ENST00000585026 GLOD5A6NK44 160 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 E9PBE3 544 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 FOXE1O00358 373 aaPredicted RBP9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 GNB5O14775 395 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 LSM1O15116 133 aaKnown RBP9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 UBDO15205 165 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 RGS14O43566 566 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 RCBTB2O95199 551 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 NCF2P19878 526 aaPredicted RBP9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 CALB2P22676 271 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 PTPN6P29350 595 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 SSTR4P31391 388 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 RASSF2P50749 326 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 MNAT1P51948 309 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 PPP2R2BQ00005 443 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 EMX2Q04743 252 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 FUT7Q11130 342 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 CSTF3Q12996 717 aaKnown RBP9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 KLF10Q13118 480 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 SNTA1Q13424 505 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 CUL3Q13618 768 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 POU4F3Q15319 338 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 CPSF6Q16630 551 aaKnown RBP eCLIP9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 C6orf136Q5SQH8 315 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 FRG2Q64ET8 278 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 BICRALQ6AI39 1079 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 MRM1Q6IN84 353 aaKnown RBP9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 TMEM81Q6P7N7 255 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 PRSS57Q6UWY2 283 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 TMEM64Q6YI46 380 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 NUP54Q7Z3B4 507 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 LUZP2Q86TE4 346 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 NUDT13Q86X67 352 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 TREML1Q86YW5 311 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 DDIASQ8IXT1 998 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 C9orf106Q8NAJ2 232 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 SIMC1Q8NDZ2 872 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 FAM83FQ8NEG4 500 aaPredicted RBP9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 OR4K14Q8NGD5 310 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 OR2T11Q8NH01 316 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 DOK4Q8TEW6 326 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 TUBGCP3Q96CW5 907 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 CMTM5Q96DZ9 223 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 ARSGQ96EG1 525 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 PPP3R2Q96LZ3 170 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 FRG2BQ96QU4 278 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 MTERF1Q99551 399 aaKnown RBP9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 OR10A5Q9H207 317 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 DDX31Q9H8H2 851 aaKnown RBP9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 CXorf21Q9HAI6 301 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 BRF2Q9HAW0 419 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 SDR39U1Q9NRG7 319 aaPredicted RBP9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 GALNT8Q9NY28 637 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 ASIC5Q9NY37 505 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 ZNF226Q9NYT6 803 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 FIS1Q9Y3D6 152 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 ASB4Q9Y574 426 aa9.77□□□□□ -0.85
CSNK1D-226ENST00000585026 A0A0A6YYD5 115 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 A0A1W2PR48 441 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 KDM4EB2RXH2 506 aaPredicted RBP9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 GUCY1B2O75343 617 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 PRKRAO75569 313 aaKnown RBP9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 PPM1BO75688 479 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 CBR3O75828 277 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 RSL1D1O76021 490 aaKnown RBP9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 LY6G6DO95868 133 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 PDYNP01213 254 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 IDO1P14902 403 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 NT5EP21589 574 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 ARL1P40616 181 aaPredicted RBP9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 PCYT1AP49585 367 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 HTR6P50406 440 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 SRYQ05066 204 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 MAD2L1Q13257 205 aaPredicted RBP9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 SQLEQ14534 574 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 KIAA0040Q15053 153 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 Q5PR19 223 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 TCHHL1Q5QJ38 904 aaPredicted RBP9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 FNDC7Q5VTL7 733 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 NXNQ6DKJ4 435 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 AAGABQ6PD74 315 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 ANGPTL8Q6UXH0 198 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 ASRGL1Q7L266 308 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 CHMP1BQ7LBR1 199 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 YRDCQ86U90 279 aaKnown RBP9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 OR14L1PQ8NHC6 308 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 RP9Q8TA86 221 aaKnown RBP9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 TSPEARQ8WU66 669 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 INTS12Q96CB8 462 aaKnown RBP9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 COX4I2Q96KJ9 171 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 PPP1R36Q96LQ0 422 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 UCN2Q96RP3 112 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 OSBPL11Q9BXB4 747 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 BRINP2Q9C0B6 783 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 C1orf21Q9H246 121 aa9.76□□□□□ -0.85
CSNK1D-226ENST00000585026 ELOVL6Q9H5J4 265 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms