RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 SH3GLB1Q9Y371 365 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 FKBP7Q9Y680 259 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CHD7Q9P2D1 2997 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CDH23Q9H251 3354 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 MYO18BQ8IUG5 2567 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 DNAH14Q0VDD8 3507 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 DNAH6Q9C0G6 4158 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 EML5Q05BV3 1969 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ERICH4A6NGS2 130 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 HMGB3O15347 200 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 HSPA12AO43301 675 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 KIF5CO60282 957 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CDH16O75309 829 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 OR6B1O95007 311 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 NTN1O95631 604 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC16A8O95907 504 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ARSBP15848 533 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 MAOAP21397 527 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 GDI1P31150 447 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CA8P35219 290 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 MAGEB1P43366 347 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 GCLMP48507 274 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 RASSF2P50749 326 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 RWDD2BP57060 319 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TPI1P60174 286 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CCZ1BP86790 482 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CCZ1P86791 482 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 MYBPC1Q00872 1141 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PNOCQ13519 176 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CARD16Q5EG05 197 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PDSS1Q5T2R2 415 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 LGSNQ5TDP6 509 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 GFI1BQ5VTD9 330 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 IL23RQ5VWK5 629 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 C18orf63Q68DL7 685 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF549Q6P9A3 640 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SCIMPQ6UWF3 145 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PTOV1Q86YD1 416 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 NELFCDQ8IXH7 590 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 DND1Q8IYX4 353 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ARHGAP24Q8N264 748 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TEX26Q8N6G2 289 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 LMNTD1Q8N9Z9 388 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CLEC1AQ8NC01 280 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TMEM185AQ8NFB2 350 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 OR52I2Q8NH67 350 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC2A14Q8TDB8 520 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TAS1R2Q8TE23 839 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC44A1Q8WWI5 657 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SMPDL3BQ92485 455 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TAAR8Q969N4 342 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TUBGCP3Q96CW5 907 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 LGALS12Q96DT0 336 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TMEM19Q96HH6 336 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 RITA1Q96K30 269 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TRIM51Q9BSJ1 452 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 STRADBQ9C0K7 418 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 POLD4Q9HCU8 107 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 MKKSQ9NPJ1 570 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 HPS4Q9NQG7 708 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PHPT1Q9NRX4 125 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ELOVL2Q9NXB9 296 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 GGA2Q9UJY4 613 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ERVK-19Q9WJR5 959 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 KCNK6Q9Y257 313 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ACACBO00763 2458 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SPEGQ15772 3267 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 OBSL1O75147 1896 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TRAV18A0A075B6X5 111 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TRBV5-7A0A0A0MS05 114 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 A0A0G2JNG1 304 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 BCLAF3A2AJT9 711 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 FPGTO14772 594 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ANGPT2O15123 496 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 MAGEB3O15480 346 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 B4GAT1O43505 415 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CYTIPO60759 359 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 IGKV3-20P01619 116 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 LIPFP07098 398 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 GSTT2P0CG29 244 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 GSTT2BP0CG30 244 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 LHCGRP22888 699 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SOX6P35712 828 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 DLSTP36957 453 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PEX19P40855 299 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 C21orf59P57076 290 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SEC61BP60468 96 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ABCE1P61221 599 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 HNRNPKP61978 463 aaKnown RBP eCLIP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 LRRC74AQ0VAA2 488 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 GAMTQ14353 236 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 KIR2DS5Q14953 304 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ELOCQ15369 112 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ZKSCAN8Q15776 578 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TTLL9Q3SXZ7 439 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ZC2HC1CQ53FD0 456 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM78AQ5JUQ0 283 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 LYSMD4Q5XG99 296 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TXNRD3NBQ6F5E7 133 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 DOK6Q6PKX4 331 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms