RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 MYBPHQ13203 477 aa16.33■□□□□ 0.2
SRSF1-208ENST00000584773 GRAMD1BQ3KR37 738 aa16.33■□□□□ 0.2
SRSF1-208ENST00000584773 C6orf136Q5SQH8 315 aa16.33■□□□□ 0.2
SRSF1-208ENST00000584773 ZAR1Q86SH2 424 aa16.33■□□□□ 0.2
SRSF1-208ENST00000584773 NUDCD3Q8IVD9 361 aa16.33■□□□□ 0.2
SRSF1-208ENST00000584773 KRTCAP2Q8N6L1 136 aa16.33■□□□□ 0.2
SRSF1-208ENST00000584773 ZFP28Q8NHY6 868 aa16.33■□□□□ 0.2
SRSF1-208ENST00000584773 MBD3L2Q8NHZ7 208 aaPredicted RBP16.33■□□□□ 0.2
SRSF1-208ENST00000584773 GPR151Q8TDV0 419 aa16.33■□□□□ 0.2
SRSF1-208ENST00000584773 ZBED6CLQ96FA7 236 aaPredicted RBP16.33■□□□□ 0.2
SRSF1-208ENST00000584773 PPP1R36Q96LQ0 422 aa16.33■□□□□ 0.2
SRSF1-208ENST00000584773 PPP3R2Q96LZ3 170 aa16.33■□□□□ 0.2
SRSF1-208ENST00000584773 SH3GL2Q99962 352 aa16.33■□□□□ 0.2
SRSF1-208ENST00000584773 ZNF559Q9BR84 538 aa16.33■□□□□ 0.2
SRSF1-208ENST00000584773 SIRT3Q9NTG7 399 aaPredicted RBP16.33■□□□□ 0.2
SRSF1-208ENST00000584773 FBXO34Q9NWN3 711 aa16.33■□□□□ 0.2
SRSF1-208ENST00000584773 CLCA1A8K7I4 914 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 SHISA8B8ZZ34 492 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 H0YC42 278 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 DVL2O14641 736 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 CTIFO43310 598 aaKnown RBP16.32■□□□□ 0.2
SRSF1-208ENST00000584773 NKX2-2O95096 273 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 GCKP35557 465 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 ASMTP46597 345 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 TPD52P55327 224 aaPredicted RBP16.32■□□□□ 0.2
SRSF1-208ENST00000584773 CLDN18P56856 261 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 RCAN2Q14206 197 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 CHI3L2Q15782 390 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 DUSP5Q16690 384 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 ATP6AP1LQ52LC2 224 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 IL23RQ5VWK5 629 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 FIGNL1Q6PIW4 674 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 ARSKQ6UWY0 536 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 ZZZ3Q8IYH5 903 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 FNDC5Q8NAU1 212 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 SLC16A11Q8NCK7 471 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 ZPLD1Q8TCW7 415 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 DUSP19Q8WTR2 217 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 NRGNQ92686 78 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 HOXB13Q92826 284 aaPredicted RBP16.32■□□□□ 0.2
SRSF1-208ENST00000584773 C20orf27Q9GZN8 174 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 CENPHQ9H3R5 247 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 CALHM2Q9HA72 323 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 ACSS1Q9NUB1 689 aaPredicted RBP16.32■□□□□ 0.2
SRSF1-208ENST00000584773 ATP6V1HQ9UI12 483 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 RAB21Q9UL25 225 aa16.32■□□□□ 0.2
SRSF1-208ENST00000584773 IFI6P09912 130 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 ZNF708P17019 499 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 HK1P19367 917 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 SERPINB5P36952 375 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 HPCAL1P37235 193 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 ASCL1P50553 236 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 DGKQP52824 942 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 DSCR4P56555 118 aaPredicted RBP16.31■□□□□ 0.2
SRSF1-208ENST00000584773 MPP2Q14168 576 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 PDCD2Q16342 344 aaPredicted RBP16.31■□□□□ 0.2
SRSF1-208ENST00000584773 CEP85LQ5SZL2 805 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 CCNJQ5T5M9 372 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 MFSD12Q6NUT3 480 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 ENPP6Q6UWR7 440 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 ADGRE4PQ86SQ3 457 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 TMEM200AQ86VY9 491 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 UBQLNLQ8IYU4 475 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 GCNT2Q8N0V5 402 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 ZNF781Q8N8C0 355 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 GATSQ8NAP1 163 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 PPP1R14CQ8TAE6 165 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 TUBGCP3Q96CW5 907 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 FAM120BQ96EK7 910 aaKnown RBP16.31■□□□□ 0.2
SRSF1-208ENST00000584773 ZIM3Q96PE6 472 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 MS4A4EQ96PG1 132 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 FAM120CQ9NX05 1096 aaKnown RBP16.31■□□□□ 0.2
SRSF1-208ENST00000584773 CLCF1Q9UBD9 225 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 KCNN3Q9UGI6 736 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 ABCG2Q9UNQ0 655 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 ANKRD17O75179 2603 aaKnown RBP16.31■□□□□ 0.2
SRSF1-208ENST00000584773 SPG11Q96JI7 2443 aa16.31■□□□□ 0.2
SRSF1-208ENST00000584773 MPDZO75970 2070 aa16.3■□□□□ 0.2
SRSF1-208ENST00000584773 TMEM114B3SHH9 223 aa16.3■□□□□ 0.2
SRSF1-208ENST00000584773 EEF1E1-BLOC1S5C9J1V9 151 aa16.3■□□□□ 0.2
SRSF1-208ENST00000584773 EEF1E1O43324 174 aaKnown RBP16.3■□□□□ 0.2
SRSF1-208ENST00000584773 EMC8O43402 210 aa16.3■□□□□ 0.2
SRSF1-208ENST00000584773 KCNH1O95259 989 aa16.3■□□□□ 0.2
SRSF1-208ENST00000584773 HSPA4LO95757 839 aa16.3■□□□□ 0.2
SRSF1-208ENST00000584773 TMIGD3P0DMS9 266 aaPredicted RBP16.3■□□□□ 0.2
SRSF1-208ENST00000584773 CTSSP25774 331 aa16.3■□□□□ 0.2
SRSF1-208ENST00000584773 RAET1LQ5VY80 246 aa16.3■□□□□ 0.2
SRSF1-208ENST00000584773 AAGABQ6PD74 315 aa16.3■□□□□ 0.2
SRSF1-208ENST00000584773 R3HCC1LQ7Z5L2 792 aaKnown RBP16.3■□□□□ 0.2
SRSF1-208ENST00000584773 CDRT4Q8N9R6 151 aa16.3■□□□□ 0.2
SRSF1-208ENST00000584773 OR4C3Q8NH37 302 aa16.3■□□□□ 0.2
SRSF1-208ENST00000584773 JADE3Q92613 823 aa16.3■□□□□ 0.2
SRSF1-208ENST00000584773 MTERF3Q96E29 417 aa16.3■□□□□ 0.2
SRSF1-208ENST00000584773 KLHDC3Q9BQ90 382 aa16.3■□□□□ 0.2
SRSF1-208ENST00000584773 CRIM1Q9NZV1 1036 aa16.3■□□□□ 0.2
SRSF1-208ENST00000584773 NTMQ9P121 344 aa16.3■□□□□ 0.2
SRSF1-208ENST00000584773 ZNF629Q9UEG4 869 aaPredicted RBP16.3■□□□□ 0.2
SRSF1-208ENST00000584773 ANKHD1Q8IWZ3 2542 aaKnown RBP16.29■□□□□ 0.2
SRSF1-208ENST00000584773 A0A1W2PRB8 838 aa16.29■□□□□ 0.2
SRSF1-208ENST00000584773 ESPNB1AK53 854 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms