RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	GOSR1	O95249	250 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	UTS2	O95399	124 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	MYL2	P10916	166 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	POU2F1	P14859	743 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CCKAR	P32238	428 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CD79B	P40259	229 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	LTB	Q06643	244 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	HSPB3	Q12988	150 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PON3	Q15166	354 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	BCL2A1	Q16548	175 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	DECR1	Q16698	335 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	EXOC3L2	Q2M3D2	409 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CYP27C1	Q4G0S4	372 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ANKRD34A	Q69YU3	496 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	OR2A2	Q6IF42	318 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ANKRD26P1	Q6NSI1	321 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ZNF551	Q7Z340	670 aa	Predicted RBP	10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CXorf67	Q86X51	503 aa	Predicted RBP	10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	GSPT2	Q8IYD1	628 aa	Known RBP	10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ZNF610	Q8N9Z0	462 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	FBXO30	Q8TB52	745 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PIK3R3	Q92569	461 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ELP4	Q96EB1	424 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	C1GALT1C1	Q96EU7	318 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	C18orf12	Q96KH6	178 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	EGLN2	Q96KS0	407 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	AMDHD1	Q96NU7	426 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	C12orf65	Q9H3J6	166 aa	Known RBP	10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	SDHAF3	Q9NRP4	125 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	BEX4	Q9NWD9	120 aa	Predicted RBP	10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	C19orf53	Q9UNZ5	99 aa	Predicted RBP	10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114		A0A087WV62	115 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	IL33	O95760	270 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	IGKV1D-16	P01601	117 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	OPN1LW	P04000	364 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CRH	P06850	196 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	GSTA1	P08263	222 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	INHBB	P09529	407 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	GABRA3	P34903	492 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	UGT2B10	P36537	528 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	GSTM5	P46439	218 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PRKAG1	P54619	331 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	EEF1A1	P68104	462 aa	Known RBP	10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PSPH	P78330	225 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	SLC29A2	Q14542	456 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	GANAB	Q14697	944 aa	Known RBP	10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ZNHIT3	Q15649	155 aa	Predicted RBP	10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	GRAMD1B	Q3KR37	738 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CFAP157	Q5JU67	520 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114		Q5PR19	223 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	EEF1A1P5	Q5VTE0	462 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CLEC6A	Q6EIG7	209 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	NOXRED1	Q6NXP6	359 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CLEC9A	Q6UXN8	241 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	APOOL	Q6UXV4	268 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ZYG11A	Q6WRX3	759 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	TRMT10C	Q7L0Y3	403 aa	Known RBP	10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	SZRD1	Q7Z422	152 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	BIVM	Q86UB2	503 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	EXOC3L1	Q86VI1	746 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	LCA5	Q86VQ0	697 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	P3H2	Q8IVL5	708 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	OR2L13	Q8N349	312 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	GATS	Q8NAP1	163 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ACMSD	Q8TDX5	336 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	MZB1	Q8WU39	189 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	SLC9A6	Q92581	669 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CIDEC	Q96AQ7	238 aa	Predicted RBP	10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	HS3ST6	Q96QI5	342 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	RHOXF2	Q9BQY4	288 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	TBL1XR1	Q9BZK7	514 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	KLHL4	Q9C0H6	718 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PTGES2	Q9H7Z7	377 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	MYNN	Q9NPC7	610 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	FAM120C	Q9NX05	1096 aa	Known RBP	10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ZNF226	Q9NYT6	803 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CLEC4A	Q9UMR7	237 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ABCG2	Q9UNQ0	655 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	VDAC3	Q9Y277	283 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	FIS1	Q9Y3D6	152 aa		10.47	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	UQCRHL	A0A096LP55	91 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	SERTM1	A2A2V5	107 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	SMIM23	A6NLE4	172 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	SMAD7	O15105	426 aa	Known RBP	10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	AKAP10	O43572	662 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	SMPD2	O60906	423 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	SEC22B	O75396	215 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	TNFRSF21	O75509	655 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	AQP8	O94778	261 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PSMG1	O95456	288 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ANGPTL1	O95841	491 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CGA	P01215	116 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	EFNA1	P20827	205 aa	Predicted RBP	10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	GPC1	P35052	558 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	EIF1AX	P47813	144 aa	Known RBP	10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	SLC6A8	P48029	635 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CLK3	P49761	638 aa	Known RBP	10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	EEFSEC	P57772	596 aa	Known RBP	10.46	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms