RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 C1GALT1C1Q96EU7 318 aa11.37□□□□□ -0.59
SS18-219ENST00000581570 VSTM2LQ96N03 204 aa11.37□□□□□ -0.59
SS18-219ENST00000581570 FRG2BQ96QU4 278 aa11.37□□□□□ -0.59
SS18-219ENST00000581570 C12orf49Q9H741 205 aa11.37□□□□□ -0.59
SS18-219ENST00000581570 NOL11Q9H8H0 719 aaKnown RBP11.37□□□□□ -0.59
SS18-219ENST00000581570 GLRX2Q9NS18 164 aa11.37□□□□□ -0.59
SS18-219ENST00000581570 STOML1Q9UBI4 398 aa11.37□□□□□ -0.59
SS18-219ENST00000581570 MCTS1Q9ULC4 181 aaKnown RBP11.37□□□□□ -0.59
SS18-219ENST00000581570 OR10H1Q9Y4A9 318 aa11.37□□□□□ -0.59
SS18-219ENST00000581570 SHISA8B8ZZ34 492 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 DLX3O60479 287 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 SYNGR4O95473 234 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 ADH6P28332 368 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 NUDT6P53370 316 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 DSCR9P59020 149 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 IFT88Q13099 833 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 TSC22D1Q15714 1073 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 TAB1Q15750 504 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 GRTP1Q5TC63 336 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 MFSD12Q6NUT3 480 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 FIGNL1Q6PIW4 674 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 ZNF619Q8N2I2 560 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 OR10D3Q8NH80 312 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 RHEBL1Q8TAI7 183 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 PYROXD1Q8WU10 500 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 ROBO4Q8WZ75 1007 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 HSD17B8Q92506 261 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 ERP27Q96DN0 273 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 FAIM2Q9BWQ8 316 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 RTN4RQ9BZR6 473 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 TRIM31Q9BZY9 425 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 GRIP2Q9C0E4 1043 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 FBXO34Q9NWN3 711 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 PAQR5Q9NXK6 330 aaPredicted RBP11.36□□□□□ -0.59
SS18-219ENST00000581570 CISD1Q9NZ45 108 aaKnown RBP11.36□□□□□ -0.59
SS18-219ENST00000581570 XPR1Q9UBH6 696 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 UTS2RQ9UKP6 389 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 SLC12A4Q9UP95 1085 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 B3GALT5Q9Y2C3 310 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 PPP2R2CQ9Y2T4 447 aa11.36□□□□□ -0.59
SS18-219ENST00000581570 TNPO3Q9Y5L0 923 aaKnown RBP11.36□□□□□ -0.59
SS18-219ENST00000581570 DPRXA6NFQ7 191 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 FAM159BA6NKW6 160 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 UBFD1O14562 309 aaKnown RBP11.35□□□□□ -0.59
SS18-219ENST00000581570 OR7A17O14581 309 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 TP73O15350 636 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 CXCL13O43927 109 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 LMX1BO60663 402 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 SIX3O95343 332 aaPredicted RBP11.35□□□□□ -0.59
SS18-219ENST00000581570 TUBBP07437 444 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 SRD5A1P18405 259 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 IL32P24001 234 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 CLK3P49761 638 aaKnown RBP11.35□□□□□ -0.59
SS18-219ENST00000581570 CCNG1P51959 295 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 DR1Q01658 176 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 BSPH1Q075Z2 132 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 SGO1Q5FBB7 561 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 SH2D4BQ5SQS7 431 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 CLEC2AQ6UVW9 174 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 ATG4DQ86TL0 474 aaPredicted RBP11.35□□□□□ -0.59
SS18-219ENST00000581570 MARCH3Q86UD3 253 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 DTX2Q86UW9 622 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 EXOC3L1Q86VI1 746 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 CTAGE3PQ8IX95 158 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 KLHL7Q8IXQ5 586 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 ARIH2OSQ8N7S6 290 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 OR9A2Q8NGT5 310 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 KCTD4Q8WVF5 259 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 ADAD1Q96M93 576 aaKnown RBP11.35□□□□□ -0.59
SS18-219ENST00000581570 KRTAP3-3Q9BYR6 98 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 KRTAP3-2Q9BYR7 98 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 TRIM2Q9C040 744 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 FAIMQ9NVQ4 179 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 FLRT3Q9NZU0 649 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 ABCG2Q9UNQ0 655 aa11.35□□□□□ -0.59
SS18-219ENST00000581570 TCRBV9S1A1TA0A576 114 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 ELOA3DA6NLF2 546 aaPredicted RBP11.34□□□□□ -0.59
SS18-219ENST00000581570 GMFGO60234 142 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 GCM2O75603 506 aaPredicted RBP11.34□□□□□ -0.59
SS18-219ENST00000581570 ESRRBO95718 433 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 CTAGE8P0CG41 777 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 SLC25A16P16260 332 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 PTNP21246 168 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 AGTR1P30556 359 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 TRA2BP62995 288 aaKnown RBP11.34□□□□□ -0.59
SS18-219ENST00000581570 GALNT1Q10472 559 aaPredicted RBP11.34□□□□□ -0.59
SS18-219ENST00000581570 FAM83EQ2M2I3 478 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 TMEM44Q2T9K0 475 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 ELOA3BQ3SY89 546 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 SFRP5Q5T4F7 317 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 AGAP6Q5VW22 663 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 GTF2IRD2BQ6EKJ0 949 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 METTL2BQ6P1Q9 378 aaKnown RBP11.34□□□□□ -0.59
SS18-219ENST00000581570 C3orf62Q6ZUJ4 267 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 CYS1Q717R9 158 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 GALNT10Q86SR1 603 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 GTF2IRD2Q86UP8 949 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 WDR75Q8IWA0 830 aaKnown RBP11.34□□□□□ -0.59
SS18-219ENST00000581570 CTAGE4Q8IX94 777 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 GABRG1Q8N1C3 465 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms