RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ABCA7Q8IZY2 2146 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 GJB5O95377 273 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 GUCA1CO95843 209 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 HEXBP07686 556 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 CALCBP10092 127 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 UMPSP11172 480 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 ANXA3P12429 323 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 DLSTP36957 453 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 MAGEA9P43362 315 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 ALDH3B2P48448 385 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 PLOD1Q02809 727 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 Q1RN00 199 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 CYBRD1Q53TN4 286 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 ZNF311Q5JNZ3 666 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 SLC25A30Q5SVS4 291 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 ATAD3CQ5T2N8 411 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 ASPHD2Q6ICH7 369 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 SULT1C3Q6IMI6 304 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 NIPAL3Q6P499 406 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 GCNT7Q6ZNI0 430 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 CYS1Q717R9 158 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 CENPUQ71F23 418 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 ZNF573Q86YE8 665 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 TFB1MQ8WVM0 346 aaKnown RBP3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 RSPH1Q8WYR4 309 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 CCT8L2Q96SF2 557 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 ZNF416Q9BWM5 594 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 GSDMCQ9BYG8 508 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 COMMD4Q9H0A8 199 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 SLC25A51Q9H1U9 297 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 RDH8Q9NYR8 311 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 SENP1Q9P0U3 644 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 AP1M2Q9Y6Q5 423 aa3.57□□□□□ -1.84
SMCHD1-205ENST00000581383 A8MX80 341 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 SLC2A10O95528 541 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 THY1P04216 161 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 SLC35E2P0CK97 266 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 CT45A10P0DMU9 189 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 PGAM2P15259 253 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 XRCC1P18887 633 aaPredicted RBP3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 PTBP1P26599 531 aaKnown RBP eCLIP3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 FNTAP49354 379 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 EMDP50402 254 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 NOVA1P51513 510 aaKnown RBP3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 PUDPQ08623 228 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 CAMK4Q16566 473 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 DCAF4L1Q3SXM0 396 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 ZNF57Q68EA5 555 aaPredicted RBP3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 LRRC8BQ6P9F7 803 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 MARCH9Q86YJ5 346 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 Q8N9G6 341 aaPredicted RBP3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 PPP1R16AQ96I34 528 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 MRPL13Q9BYD1 178 aaKnown RBP3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 WDR76Q9H967 626 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 POLD4Q9HCU8 107 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 EXOSC3Q9NQT5 275 aaKnown RBP3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 SLC35D1Q9NTN3 355 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 SLC2A6Q9UGQ3 507 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 ZNF107Q9UII5 783 aaPredicted RBP3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 B9D1Q9UPM9 204 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 EIF3LQ9Y262 564 aaKnown RBP3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 NAALAD2Q9Y3Q0 740 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 KIF3AQ9Y496 699 aa3.56□□□□□ -1.84
SMCHD1-205ENST00000581383 USP6P35125 1406 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 FAM74A7A6NL05 159 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 NOL4O94818 638 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 ANP32DO95626 131 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 KRT13P13646 458 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 CDH5P33151 784 aaPredicted RBP3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 KIF5BP33176 963 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 KLHL30Q0D2K2 578 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 USH1GQ495M9 461 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 TMEM52BQ4KMG9 183 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 FAM74A3Q4VXF1 159 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 TMEM41BQ5BJD5 291 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 MARC1Q5VT66 337 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 MEDAGQ5VYS4 303 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 SCYL2Q6P3W7 929 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 CBLN3Q6UW01 205 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 TMEM184AQ6ZMB5 413 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 LANCL3Q6ZV70 420 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 HSD11B1LQ7Z5J1 315 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 GRAMD2AQ8IUY3 354 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 MCOLN2Q8IZK6 566 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 CENPLQ8N0S6 344 aaPredicted RBP3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 KLHL30-AS1Q8NEE0 82 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 C18orf25Q96B23 403 aaPredicted RBP3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 TMEM121Q9BTD3 319 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 TM2D1Q9BX74 207 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 OPN3Q9H1Y3 402 aaPredicted RBP3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 RHOJQ9H4E5 214 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 COG4Q9H9E3 785 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 CALHM2Q9HA72 323 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 PALMDQ9NP74 551 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 SH3BGRL2Q9UJC5 107 aa3.55□□□□□ -1.84
SMCHD1-205ENST00000581383 A0A1W2PQ72 361 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 FRG2CA6NGY1 282 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 ZSCAN5BA6NJL1 495 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 SLC17A2O00624 439 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 PHOX2AO14813 284 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms