RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 PSG6Q00889 435 aa17.07■□□□□ 0.32
NDEL1-209ENST00000580738 TSC22D1Q15714 1073 aa17.07■□□□□ 0.32
NDEL1-209ENST00000580738 TMEM44Q2T9K0 475 aa17.07■□□□□ 0.32
NDEL1-209ENST00000580738 PGGHGQ32M88 737 aa17.07■□□□□ 0.32
NDEL1-209ENST00000580738 SH2D4BQ5SQS7 431 aa17.07■□□□□ 0.32
NDEL1-209ENST00000580738 NCMAPQ5T1S8 102 aa17.07■□□□□ 0.32
NDEL1-209ENST00000580738 METTL2BQ6P1Q9 378 aaKnown RBP17.07■□□□□ 0.32
NDEL1-209ENST00000580738 RPS27LQ71UM5 84 aaKnown RBP17.07■□□□□ 0.32
NDEL1-209ENST00000580738 C1orf52Q8N6N3 182 aaKnown RBP17.07■□□□□ 0.32
NDEL1-209ENST00000580738 OR7G2Q8NG99 324 aa17.07■□□□□ 0.32
NDEL1-209ENST00000580738 ERP27Q96DN0 273 aa17.07■□□□□ 0.32
NDEL1-209ENST00000580738 MTBPQ96DY7 904 aa17.07■□□□□ 0.32
NDEL1-209ENST00000580738 C12orf49Q9H741 205 aa17.07■□□□□ 0.32
NDEL1-209ENST00000580738 SDHAF3Q9NRP4 125 aa17.07■□□□□ 0.32
NDEL1-209ENST00000580738 CDC42EP3Q9UKI2 254 aa17.07■□□□□ 0.32
NDEL1-209ENST00000580738 PCTPQ9UKL6 214 aa17.07■□□□□ 0.32
NDEL1-209ENST00000580738 PCNX3Q9H6A9 2034 aa17.07■□□□□ 0.32
NDEL1-209ENST00000580738 SVEP1Q4LDE5 3571 aa17.07■□□□□ 0.32
NDEL1-209ENST00000580738 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.06■□□□□ 0.321e-8■■■□□ 15.8
NDEL1-209ENST00000580738 A0A1W2PP18 115 aa17.06■□□□□ 0.32
NDEL1-209ENST00000580738 CCDC189A1A4V9 331 aa17.06■□□□□ 0.32
NDEL1-209ENST00000580738 HMX2A2RU54 273 aa17.06■□□□□ 0.32
NDEL1-209ENST00000580738 HAX1O00165 279 aa17.06■□□□□ 0.32
NDEL1-209ENST00000580738 EIF3HO15372 352 aaKnown RBP eCLIP17.06■□□□□ 0.325e-9■■■■□ 21.8
NDEL1-209ENST00000580738 KLHL2O95198 593 aa17.06■□□□□ 0.32
NDEL1-209ENST00000580738 CD8AP01732 235 aa17.06■□□□□ 0.32
NDEL1-209ENST00000580738 OPN1LWP04000 364 aa17.06■□□□□ 0.32
NDEL1-209ENST00000580738 CD3EP07766 207 aa17.06■□□□□ 0.32
NDEL1-209ENST00000580738 SRSF2Q01130 221 aaKnown RBP17.06■□□□□ 0.32
NDEL1-209ENST00000580738 ZNF672Q499Z4 452 aaPredicted RBP17.06■□□□□ 0.32
NDEL1-209ENST00000580738 GLYR1Q49A26 553 aaPredicted RBP17.06■□□□□ 0.32
NDEL1-209ENST00000580738 MROH9Q5TGP6 573 aa17.06■□□□□ 0.32
NDEL1-209ENST00000580738 MFSD12Q6NUT3 480 aa17.06■□□□□ 0.32
NDEL1-209ENST00000580738 ZNF619Q8N2I2 560 aa17.06■□□□□ 0.32
NDEL1-209ENST00000580738 OR4F6Q8NGB9 312 aa17.06■□□□□ 0.32
NDEL1-209ENST00000580738 OR10D3Q8NH80 312 aa17.06■□□□□ 0.32
NDEL1-209ENST00000580738 EXOSC8Q96B26 276 aaKnown RBP17.06■□□□□ 0.32
NDEL1-209ENST00000580738 HBEGFQ99075 208 aa17.06■□□□□ 0.32
NDEL1-209ENST00000580738 DPH5Q9H2P9 285 aa17.06■□□□□ 0.32
NDEL1-209ENST00000580738 FANCFQ9NPI8 374 aa17.06■□□□□ 0.32
NDEL1-209ENST00000580738 ABCG2Q9UNQ0 655 aa17.06■□□□□ 0.32
NDEL1-209ENST00000580738 IGHV4-30-2A0A087WSY4 118 aa17.05■□□□□ 0.32
NDEL1-209ENST00000580738 A0A096LNT2 108 aa17.05■□□□□ 0.32
NDEL1-209ENST00000580738 PPP6CO00743 305 aa17.05■□□□□ 0.32
NDEL1-209ENST00000580738 PLOD3O60568 738 aa17.05■□□□□ 0.32
NDEL1-209ENST00000580738 NTN1O95631 604 aa17.05■□□□□ 0.32
NDEL1-209ENST00000580738 ESRRBO95718 433 aa17.05■□□□□ 0.32
NDEL1-209ENST00000580738 IL3P08700 152 aa17.05■□□□□ 0.32
NDEL1-209ENST00000580738 GSTA2P09210 222 aa17.05■□□□□ 0.32
NDEL1-209ENST00000580738 TRA2BP62995 288 aaKnown RBP17.05■□□□□ 0.32
NDEL1-209ENST00000580738 STK32CQ86UX6 486 aa17.05■□□□□ 0.32
NDEL1-209ENST00000580738 STEAP2Q8NFT2 490 aa17.05■□□□□ 0.32
NDEL1-209ENST00000580738 KBTBD8Q8NFY9 601 aa17.05■□□□□ 0.32
NDEL1-209ENST00000580738 FBF1Q8TES7 1133 aa17.05■□□□□ 0.32
NDEL1-209ENST00000580738 C11orf24Q96F05 449 aaPredicted RBP17.05■□□□□ 0.32
NDEL1-209ENST00000580738 ADGRG7Q96K78 797 aa17.05■□□□□ 0.32
NDEL1-209ENST00000580738 HS6ST2Q96MM7 605 aa17.05■□□□□ 0.32
NDEL1-209ENST00000580738 NPAS1Q99742 590 aa17.05■□□□□ 0.32
NDEL1-209ENST00000580738 C19orf24Q9BVV8 132 aa17.05■□□□□ 0.32
NDEL1-209ENST00000580738 TAS2R9Q9NYW1 312 aa17.05■□□□□ 0.32
NDEL1-209ENST00000580738 A0A096LPK6 155 aa17.04■□□□□ 0.32
NDEL1-209ENST00000580738 CXCL13O43927 109 aa17.04■□□□□ 0.32
NDEL1-209ENST00000580738 SSX4O60224 188 aa17.04■□□□□ 0.32
NDEL1-209ENST00000580738 GCM2O75603 506 aaPredicted RBP17.04■□□□□ 0.32
NDEL1-209ENST00000580738 ZNF155Q12901 538 aaPredicted RBP17.04■□□□□ 0.32
NDEL1-209ENST00000580738 TAB1Q15750 504 aa17.04■□□□□ 0.32
NDEL1-209ENST00000580738 GGTA1PQ4G0N0 100 aa17.04■□□□□ 0.32
NDEL1-209ENST00000580738 TECRLQ5HYJ1 363 aa17.04■□□□□ 0.32
NDEL1-209ENST00000580738 KLC3Q6P597 504 aa17.04■□□□□ 0.32
NDEL1-209ENST00000580738 FIGNL1Q6PIW4 674 aa17.04■□□□□ 0.32
NDEL1-209ENST00000580738 GALNT10Q86SR1 603 aa17.04■□□□□ 0.32
NDEL1-209ENST00000580738 PLD6Q8N2A8 252 aaKnown RBP17.04■□□□□ 0.32
NDEL1-209ENST00000580738 SELENOMQ8WWX9 145 aa17.04■□□□□ 0.32
NDEL1-209ENST00000580738 MRRFQ96E11 262 aaKnown RBP17.04■□□□□ 0.32
NDEL1-209ENST00000580738 KCNK17Q96T54 332 aa17.04■□□□□ 0.32
NDEL1-209ENST00000580738 TRAF4Q9BUZ4 470 aaPredicted RBP17.04■□□□□ 0.32
NDEL1-209ENST00000580738 BEX2Q9BXY8 128 aa17.04■□□□□ 0.32
NDEL1-209ENST00000580738 TRIM2Q9C040 744 aa17.04■□□□□ 0.32
NDEL1-209ENST00000580738 ESRP2Q9H6T0 727 aaKnown RBP17.04■□□□□ 0.32
NDEL1-209ENST00000580738 FAM120CQ9NX05 1096 aaKnown RBP17.04■□□□□ 0.32
NDEL1-209ENST00000580738 MCTS1Q9ULC4 181 aaKnown RBP17.04■□□□□ 0.32
NDEL1-209ENST00000580738 VDAC3Q9Y277 283 aa17.04■□□□□ 0.32
NDEL1-209ENST00000580738 FAM234BA2RU67 622 aa17.03■□□□□ 0.32
NDEL1-209ENST00000580738 PTNP21246 168 aa17.03■□□□□ 0.32
NDEL1-209ENST00000580738 AGTR1P30556 359 aa17.03■□□□□ 0.32
NDEL1-209ENST00000580738 BSPH1Q075Z2 132 aa17.03■□□□□ 0.32
NDEL1-209ENST00000580738 TMEM249Q2WGJ8 235 aa17.03■□□□□ 0.32
NDEL1-209ENST00000580738 CYP27C1Q4G0S4 372 aa17.03■□□□□ 0.32
NDEL1-209ENST00000580738 LETMD1Q6P1Q0 360 aa17.03■□□□□ 0.32
NDEL1-209ENST00000580738 APOOLQ6UXV4 268 aa17.03■□□□□ 0.32
NDEL1-209ENST00000580738 DNAJC14Q6Y2X3 702 aaPredicted RBP17.03■□□□□ 0.32
NDEL1-209ENST00000580738 CCDC91Q7Z6B0 441 aa17.03■□□□□ 0.32
NDEL1-209ENST00000580738 GABRG1Q8N1C3 465 aa17.03■□□□□ 0.32
NDEL1-209ENST00000580738 RHNO1Q9BSD3 238 aa17.03■□□□□ 0.32
NDEL1-209ENST00000580738 BRF2Q9HAW0 419 aa17.03■□□□□ 0.32
NDEL1-209ENST00000580738 BARX1Q9HBU1 254 aaPredicted RBP17.03■□□□□ 0.32
NDEL1-209ENST00000580738 GLRX2Q9NS18 164 aa17.03■□□□□ 0.32
NDEL1-209ENST00000580738 FBXO34Q9NWN3 711 aa17.03■□□□□ 0.32
NDEL1-209ENST00000580738 SENP1Q9P0U3 644 aa17.03■□□□□ 0.32
NDEL1-209ENST00000580738 ALPK2Q86TB3 2170 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms