RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 APH1BQ8WW43 257 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 CDS1Q92903 461 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 MYDGFQ969H8 173 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 ZNF607Q96SK3 696 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 SLIRPQ9GZT3 109 aaKnown RBP18.86■□□□□ 0.61
SMG8-203ENST00000578922 RASSF1Q9NS23 344 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 SEC14L3Q9UDX4 400 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 PMF1-BGLAPU3KQ54 211 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 IGHV5-10-1A0A0J9YXX1 117 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 A8MVJ9 347 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 H0YIG0 161 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 CLDN4O14493 209 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 HYAL3O43820 417 aaPredicted RBP18.86■□□□□ 0.61
SMG8-203ENST00000578922 CTNSO60931 367 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 SLC35E2P0CK97 266 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 BMP4P12644 408 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 TGFBR2P37173 567 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 RPS3AP61247 264 aaKnown RBP18.86■□□□□ 0.61
SMG8-203ENST00000578922 NCS1P62166 190 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 LSM3P62310 102 aaKnown RBP18.86■□□□□ 0.61
SMG8-203ENST00000578922 MGAT2Q10469 447 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 MFSD4BQ5TF39 518 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 ZC3H14Q6PJT7 736 aaKnown RBP18.86■□□□□ 0.61
SMG8-203ENST00000578922 C16orf62Q7Z3J2 963 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 GPR32P1Q8NGA4 272 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 NDUFAF4Q9P032 175 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 NTMQ9P121 344 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 C19orf53Q9UNZ5 99 aaPredicted RBP18.86■□□□□ 0.61
SMG8-203ENST00000578922 TESMINQ9Y4I5 508 aa18.86■□□□□ 0.61
SMG8-203ENST00000578922 NINQ8N4C6 2090 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 J3KTA2 159 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 CKMT1AP12532 417 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 RRM2P31350 389 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 GGT2P36268 569 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 MAGEA8P43361 318 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 TBCEQ15813 527 aaPredicted RBP18.85■□□□□ 0.61
SMG8-203ENST00000578922 AHSA2Q719I0 299 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 ZNF595Q8IYB9 648 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 ZHX1-C8orf76Q96EF9 292 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 CCDC74BQ96LY2 380 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 DPYSL5Q9BPU6 564 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 COPS4Q9BT78 406 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 BTBD2Q9BX70 525 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 PSORS1C1Q9UIG5 152 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 A3GALT2U3KPV4 340 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 EFCAB9A8MZ26 197 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 HRKO00198 91 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 ATP6V1G1O75348 118 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 PDE9AO76083 593 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 ACP2P11117 423 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 ANXA8P13928 327 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 TGM1P22735 817 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 CD40LGP29965 261 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 DUSP5Q16690 384 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 ATAD3BQ5T9A4 648 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 CDC73Q6P1J9 531 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 TUBA3EQ6PEY2 450 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 OR4D9Q8NGE8 314 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 GEMIN6Q8WXD5 167 aaKnown RBP18.85■□□□□ 0.61
SMG8-203ENST00000578922 RBM18Q96H35 190 aaKnown RBP18.85■□□□□ 0.61
SMG8-203ENST00000578922 ARMC7Q9H6L4 198 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 RNF6Q9Y252 685 aa18.85■□□□□ 0.61
SMG8-203ENST00000578922 ASCC3Q8N3C0 2202 aaKnown RBP18.84■□□□□ 0.61
SMG8-203ENST00000578922 TNFRSF11BO00300 401 aa18.84■□□□□ 0.61
SMG8-203ENST00000578922 KHNYNO15037 678 aaKnown RBP18.84■□□□□ 0.61
SMG8-203ENST00000578922 RECKO95980 971 aa18.84■□□□□ 0.61
SMG8-203ENST00000578922 PPP5CP53041 499 aa18.84■□□□□ 0.61
SMG8-203ENST00000578922 CHRNEQ04844 493 aa18.84■□□□□ 0.61
SMG8-203ENST00000578922 PUM1Q14671 1186 aaKnown RBP eCLIP18.84■□□□□ 0.61
SMG8-203ENST00000578922 PHF19Q5T6S3 580 aa18.84■□□□□ 0.61
SMG8-203ENST00000578922 BMP8AQ7Z5Y6 402 aa18.84■□□□□ 0.61
SMG8-203ENST00000578922 PRSS58Q8IYP2 241 aa18.84■□□□□ 0.61
SMG8-203ENST00000578922 VWA5B2Q8N398 1253 aa18.84■□□□□ 0.61
SMG8-203ENST00000578922 OR52R1Q8NGF1 315 aa18.84■□□□□ 0.61
SMG8-203ENST00000578922 RHOXF1Q8NHV9 184 aa18.84■□□□□ 0.61
SMG8-203ENST00000578922 VANGL1Q8TAA9 524 aaPredicted RBP18.84■□□□□ 0.61
SMG8-203ENST00000578922 RIT1Q92963 219 aa18.84■□□□□ 0.61
SMG8-203ENST00000578922 DACH2Q96NX9 599 aa18.84■□□□□ 0.61
SMG8-203ENST00000578922 OR6C1Q96RD1 312 aa18.84■□□□□ 0.61
SMG8-203ENST00000578922 RHNO1Q9BSD3 238 aa18.84■□□□□ 0.61
SMG8-203ENST00000578922 MMP27Q9H306 513 aa18.84■□□□□ 0.61
SMG8-203ENST00000578922 LYVE1Q9Y5Y7 322 aa18.84■□□□□ 0.61
SMG8-203ENST00000578922 GPC6Q9Y625 555 aaPredicted RBP18.84■□□□□ 0.61
SMG8-203ENST00000578922 PLOD3O60568 738 aa18.83■□□□□ 0.61
SMG8-203ENST00000578922 PDX1P52945 283 aa18.83■□□□□ 0.61
SMG8-203ENST00000578922 ADAMTS20P59510 1910 aa18.83■□□□□ 0.61
SMG8-203ENST00000578922 SQSTM1Q13501 440 aa18.83■□□□□ 0.61
SMG8-203ENST00000578922 MINDY4Q4G0A6 757 aa18.83■□□□□ 0.61
SMG8-203ENST00000578922 CCNJQ5T5M9 372 aa18.83■□□□□ 0.61
SMG8-203ENST00000578922 AGAP7PQ5VUJ5 663 aa18.83■□□□□ 0.61
SMG8-203ENST00000578922 COMTD1Q86VU5 262 aa18.83■□□□□ 0.61
SMG8-203ENST00000578922 KRT73Q86Y46 540 aa18.83■□□□□ 0.61
SMG8-203ENST00000578922 LACC1Q8IV20 430 aa18.83■□□□□ 0.61
SMG8-203ENST00000578922 GALNT12Q8IXK2 581 aa18.83■□□□□ 0.61
SMG8-203ENST00000578922 OR52J3Q8NH60 311 aa18.83■□□□□ 0.61
SMG8-203ENST00000578922 BBS10Q8TAM1 723 aa18.83■□□□□ 0.61
SMG8-203ENST00000578922 ADAMTS18Q8TE60 1221 aa18.83■□□□□ 0.61
SMG8-203ENST00000578922 PROX1Q92786 737 aa18.83■□□□□ 0.61
SMG8-203ENST00000578922 ZG16BQ96DA0 208 aa18.83■□□□□ 0.61
SMG8-203ENST00000578922 DGAT2Q96PD7 388 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms