RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 PEX5LQ8IYB4 626 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 LAS2Q8IYD9 372 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 OR52L1Q8NGH7 329 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 RSPH9Q9H1X1 276 aaPredicted RBP12.81□□□□□ -0.36
NDEL1-204ENST00000578172 LRRN3Q9H3W5 708 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 ISG20L2Q9H9L3 353 aaKnown RBP12.81□□□□□ -0.36
NDEL1-204ENST00000578172 CD93Q9NPY3 652 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 NDRG2Q9UN36 371 aaKnown RBP12.81□□□□□ -0.36
NDEL1-204ENST00000578172 STON1Q9Y6Q2 735 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 SEMG1P04279 462 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 SYPP08247 313 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 ARL14Q8N4G2 192 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 OR5K2Q8NHB8 316 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 SPPL3Q8TCT6 385 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 GCDHQ92947 438 aaPredicted RBP12.81□□□□□ -0.36
NDEL1-204ENST00000578172 DPEP2Q9H4A9 486 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 CCDC86Q9H6F5 360 aaKnown RBP12.81□□□□□ -0.36
NDEL1-204ENST00000578172 THSD1Q9NS62 852 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 KCMF1Q9P0J7 381 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 A4GNTQ9UNA3 340 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 POM121BA6NF01 834 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 CACNB4O00305 520 aaPredicted RBP12.8□□□□□ -0.36
NDEL1-204ENST00000578172 HIST1H1TP22492 207 aaPredicted RBP12.8□□□□□ -0.36
NDEL1-204ENST00000578172 IFNGR2P38484 337 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 RAB28P51157 221 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 RPL6Q02878 288 aaKnown RBP12.8□□□□□ -0.36
NDEL1-204ENST00000578172 SLC36A4Q6YBV0 504 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 OR8D4Q8NGM9 314 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 SNAPC3Q92966 411 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 SLC6A18Q96N87 628 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 PTCHD1Q96NR3 888 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 FOXN4Q96NZ1 517 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 RSPO3Q9BXY4 272 aaPredicted RBP12.8□□□□□ -0.36
NDEL1-204ENST00000578172 SIRT3Q9NTG7 399 aaPredicted RBP12.8□□□□□ -0.36
NDEL1-204ENST00000578172 FBXO34Q9NWN3 711 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 MCUBQ9NWR8 336 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 MRPL39Q9NYK5 338 aaKnown RBP12.8□□□□□ -0.36
NDEL1-204ENST00000578172 PPIL1Q9Y3C6 166 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 CENPVL1A0A0U1RR11 272 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 H3BQ06 376 aaPredicted RBP12.8□□□□□ -0.36
NDEL1-204ENST00000578172 TIMP1P01033 207 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 SRP9P49458 86 aaKnown RBP12.8□□□□□ -0.36
NDEL1-204ENST00000578172 ANXA11P50995 505 aaKnown RBP12.8□□□□□ -0.36
NDEL1-204ENST00000578172 DCDC1P59894 354 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 ILKQ13418 452 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 AGERQ15109 404 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 TRMT12Q53H54 448 aaKnown RBP12.8□□□□□ -0.36
NDEL1-204ENST00000578172 PRRT3Q5FWE3 981 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 LCTLQ6UWM7 567 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 PFN4Q8NHR9 129 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 NKX3-1Q99801 234 aaPredicted RBP12.8□□□□□ -0.36
NDEL1-204ENST00000578172 FBXL4Q9UKA2 621 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 TBC1D24Q9ULP9 559 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 ARHGEF17Q96PE2 2063 aaPredicted RBP12.8□□□□□ -0.36
NDEL1-204ENST00000578172 ASXL3Q9C0F0 2248 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 LOC105369274A0A096LPK9 316 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 CHRNB1P11230 501 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 CPMP14384 443 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 PRDX1Q06830 199 aaKnown RBP12.8□□□□□ -0.36
NDEL1-204ENST00000578172 ZNF155Q12901 538 aaPredicted RBP12.8□□□□□ -0.36
NDEL1-204ENST00000578172 EIF4HQ15056 248 aaKnown RBP12.8□□□□□ -0.36
NDEL1-204ENST00000578172 BHLHB9Q6PI77 547 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 OR4N4Q8N0Y3 316 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 POP5Q969H6 163 aaKnown RBP12.8□□□□□ -0.36
NDEL1-204ENST00000578172 VOPP1Q96AW1 172 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 C11orf49Q9H6J7 331 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 GALNT9Q9HCQ5 603 aa12.8□□□□□ -0.36
NDEL1-204ENST00000578172 LRIT2A6NDA9 550 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 PEX12O00623 359 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 IFNA16P05015 189 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 PRKAR1AP10644 381 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 SHC1P29353 583 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 ST3GAL3Q11203 375 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 KLHL22Q53GT1 634 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 SLX4IPQ5VYV7 408 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 OR2A14Q96R47 310 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 SPATA9Q9BWV2 254 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 OR2B2Q9GZK3 357 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 PLXNA4Q9HCM2 1894 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 C4orf51C9J302 202 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 CD3GP09693 182 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 ACADMP11310 421 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 ACADLP28330 430 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 CMPK1P30085 196 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 PSMB10P40306 273 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 OR10A3P58181 314 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 SHC2P98077 582 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 TFF2Q03403 129 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 PRKCDQ05655 676 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 GPM6BQ13491 265 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 TATDN3Q17R31 274 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 SAXO2Q658L1 398 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 PRSS41Q7RTY9 318 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 ATCAYQ86WG3 371 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 FBLIM1Q8WUP2 373 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 ZMYND19Q96E35 227 aaPredicted RBP12.79□□□□□ -0.36
NDEL1-204ENST00000578172 FN3KQ9H479 309 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 FBXO9Q9UK97 447 aaPredicted RBP12.79□□□□□ -0.36
NDEL1-204ENST00000578172 SH3D21A4FU49 640 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 SPINT1O43278 529 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms