RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 TSPAN2O60636 221 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 KCNK2O95069 426 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 IL33O95760 270 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 LDLRP01130 860 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 NGFRP08138 427 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 HNRNPCL4P0DMR1 293 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 OR12D1P0DN82 309 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ITGAMP11215 1152 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 HOXB4P17483 251 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 GABRA3P34903 492 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SOX11P35716 441 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 GSK3BP49841 420 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 PNLIPRP2P54317 469 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 PCBP3P57721 371 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 LIPEQ05469 1076 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CEACAM7Q14002 265 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ELOAQ14241 798 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 VMACQ2NL98 169 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 TCTN3Q6NUS6 607 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 TMEM81Q6P7N7 255 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 IGFL2Q6UWQ7 119 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 LRRC74BQ6ZQY2 392 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 RPS19BP1Q86WX3 136 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ZZZ3Q8IYH5 903 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 FBXW8Q8N3Y1 598 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 KIF2BQ8N4N8 673 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SLC5A8Q8N695 610 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 C11orf65Q8NCR3 313 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 TNIP2Q8NFZ5 429 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 OR5D16Q8NGK9 328 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 XAGE5Q8WWM1 108 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ZNF354BQ96LW1 612 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 LMF1Q96S06 567 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 G6PC3Q9BUM1 346 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ZNF350Q9GZX5 532 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ING2Q9H160 280 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 MUC13Q9H3R2 512 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 GORASP2Q9H8Y8 452 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 MTHFD2LQ9H903 347 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CALML5Q9NZT1 146 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 P2RX2Q9UBL9 471 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 MRTO4Q9UKD2 239 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CBLCQ9ULV8 474 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 NPFFR2Q9Y5X5 522 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 DSPPQ9NZW4 1301 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SHANK1Q9Y566 2161 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ELOVL7A1L3X0 281 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 OR6C70A6NIJ9 312 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 NPIPB9F8W1W9 429 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 HNRNPRO43390 633 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ABCB7O75027 752 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 STX11O75558 287 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 GCM2O75603 506 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CELA2AP08217 269 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 NUDT7P0C024 238 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 FBXO45P0C2W1 286 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ETS2P15036 469 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ME2P23368 584 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ABCD3P28288 659 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 PCGF2P35227 344 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 NR0B1P51843 470 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 PSMD4P55036 377 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 NRG3P56975 720 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CORO7P57737 925 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 RPS26P62854 115 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 POU6F2P78424 691 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 MRPS22P82650 360 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CDK6Q00534 326 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 FUT5Q11128 374 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 TRAP1Q12931 704 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 TRIM25Q14258 630 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 MEP1AQ16819 746 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ZNF791Q3KP31 576 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CRB2Q5IJ48 1285 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 GCNT6Q5T4J0 391 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ATAD3BQ5T9A4 648 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ATP1A1-AS1Q5TC04 95 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 HLA-DQA1Q5Y7H0 255 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 REEP3Q6NUK4 255 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 TNFAIP8L2Q6P589 184 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SLC44A2Q8IWA5 706 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 GPALPP1Q8IXQ4 340 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 MICU2Q8IYU8 434 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 TAGAPQ8N103 731 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 GALNT16Q8N428 558 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 AMER2Q8N7J2 671 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 OR2T12Q8NG77 320 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 PNPT1Q8TCS8 783 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 GPR151Q8TDV0 419 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SLC9A6Q92581 669 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 DIO2Q92813 273 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CDS1Q92903 461 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 RAB8BQ92930 207 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 POP5Q969H6 163 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 THOC3Q96J01 351 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 RASL10BQ96S79 203 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SECISBP2Q96T21 854 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 YIPF4Q9BSR8 244 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 THTPAQ9BU02 230 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 TRIM8Q9BZR9 551 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms