RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 FAM120CQ9NX05 1096 aaKnown RBP8.05□□□□□ -1.12
SMG6-218ENST00000575454 MED11Q9P086 117 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 SENP1Q9P0U3 644 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 TMCO1Q9UM00 188 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 SLC12A4Q9UP95 1085 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 MAGED1Q9Y5V3 778 aaPredicted RBP8.05□□□□□ -1.12
SMG6-218ENST00000575454 OR7A17O14581 309 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 TP73O15350 636 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 FADS1O60427 444 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 COQ9O75208 318 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 SLITRK5O94991 958 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 KLHL2O95198 593 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 TUBBP07437 444 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 ZNF17P17021 662 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 ME2P23368 584 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 IL32P24001 234 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 MPIP34949 423 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 SLC6A8P48029 635 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 VLDLRP98155 873 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 LOXL1Q08397 574 aaPredicted RBP8.04□□□□□ -1.12
SMG6-218ENST00000575454 C17orf67Q0P5P2 114 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 FAPQ12884 760 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 CALCOCO2Q13137 446 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 STX5Q13190 355 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 HEPACAMQ14CZ8 416 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 P2RY6Q15077 328 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 TMEM249Q2WGJ8 235 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 KRTAP24-1Q3LI83 254 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 GGTA1PQ4G0N0 100 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 PDSS1Q5T2R2 415 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 CLEC2AQ6UVW9 174 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 NPSR1Q6W5P4 371 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 GGNQ86UU5 652 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 PPM1NQ8N819 430 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 OR5M1Q8NGP8 315 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 RAB3IL1Q8TBN0 382 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 DUSP19Q8WTR2 217 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 MTBPQ96DY7 904 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 REXO5Q96IC2 774 aaKnown RBP8.04□□□□□ -1.12
SMG6-218ENST00000575454 RADILQ96JH8 1075 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 CDK15Q96Q40 435 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 TNFRSF13CQ96RJ3 184 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 TRAF4Q9BUZ4 470 aaPredicted RBP8.04□□□□□ -1.12
SMG6-218ENST00000575454 C19orf24Q9BVV8 132 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 TBL1XR1Q9BZK7 514 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 FOLH1BQ9HBA9 442 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 TIGARQ9NQ88 270 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 XPR1Q9UBH6 696 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 CLEC4AQ9UMR7 237 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 SNX6Q9UNH7 406 aa8.04□□□□□ -1.12
SMG6-218ENST00000575454 USF3Q68DE3 2245 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 ROS1P08922 2347 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 IGLV3-32A0A0A0MS00 114 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 B4DXG7 233 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 CCDC188H7C350 402 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 ADAMDEC1O15204 470 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 SSX4O60224 188 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 SIX3O95343 332 aaPredicted RBP8.03□□□□□ -1.12
SMG6-218ENST00000575454 OTCP00480 354 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 C2P06681 752 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 SLC25A16P16260 332 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 STX2P32856 288 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 NUDT6P53370 316 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 CASP9P55211 416 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 RAC1P63000 192 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 GALNT1Q10472 559 aaPredicted RBP8.03□□□□□ -1.12
SMG6-218ENST00000575454 ZNF155Q12901 538 aaPredicted RBP8.03□□□□□ -1.12
SMG6-218ENST00000575454 RNPS1Q15287 305 aaKnown RBP8.03□□□□□ -1.12
SMG6-218ENST00000575454 ZNHIT3Q15649 155 aaPredicted RBP8.03□□□□□ -1.12
SMG6-218ENST00000575454 TMEM44Q2T9K0 475 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 PGGHGQ32M88 737 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 SGO1Q5FBB7 561 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 TCHHL1Q5QJ38 904 aaPredicted RBP8.03□□□□□ -1.12
SMG6-218ENST00000575454 TMEM201Q5SNT2 666 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 SFRP5Q5T4F7 317 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 LGSNQ5TDP6 509 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 AGAP6Q5VW22 663 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 CYB5R2Q6BCY4 276 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 FIGNL1Q6PIW4 674 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 ESPNLQ6ZVH7 1005 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 DTX2Q86UW9 622 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 FAM9CQ8IZT9 166 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 CENPLQ8N0S6 344 aaPredicted RBP8.03□□□□□ -1.12
SMG6-218ENST00000575454 SLC35F6Q8N357 371 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 GTPBP8Q8N3Z3 284 aaPredicted RBP8.03□□□□□ -1.12
SMG6-218ENST00000575454 PTGR2Q8N8N7 351 aaPredicted RBP8.03□□□□□ -1.12
SMG6-218ENST00000575454 OR10H5Q8NGA6 315 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 OR4N2Q8NGD1 307 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 OR9A2Q8NGT5 310 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 OR10D3Q8NH80 312 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 OR2V1Q8NHB1 315 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 PIWIL2Q8TC59 973 aaKnown RBP8.03□□□□□ -1.12
SMG6-218ENST00000575454 KCTD4Q8WVF5 259 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 SELENOMQ8WWX9 145 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 KAT2AQ92830 837 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 ZBTB8AQ96BR9 441 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 POTEKPQ9BYX7 375 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 TRIM2Q9C040 744 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 C3orf14Q9HBI5 128 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 GP6Q9HCN6 339 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms