RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 OCLNQ16625 522 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 DECR1Q16698 335 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 ANKDD1AQ495B1 522 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 EXOSC6Q5RKV6 272 aaKnown RBP13.07□□□□□ -0.32
VPS33B-208ENST00000574755 MEDAGQ5VYS4 303 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 PTCRAQ6ISU1 281 aaPredicted RBP13.07□□□□□ -0.32
VPS33B-208ENST00000574755 RANBP3LQ86VV4 465 aaPredicted RBP13.07□□□□□ -0.32
VPS33B-208ENST00000574755 OR52R1Q8NGF1 315 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 TMEM255BQ8WV15 326 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 HLA-CQ95604 372 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 PEX11GQ96HA9 241 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 LRR1Q96L50 414 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 OR5M11Q96RB7 305 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 DSN1Q9H410 356 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 SLC7A7Q9UM01 511 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 CEP192Q8TEP8 1941 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 LILRA5A6NI73 299 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 AQP9O43315 295 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 KIAA0513O60268 411 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 SDC3O75056 442 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 AK1P00568 194 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 THY1P04216 161 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 RPLP0P05388 317 aaKnown RBP13.07□□□□□ -0.32
VPS33B-208ENST00000574755 RNH1P13489 461 aaKnown RBP13.07□□□□□ -0.32
VPS33B-208ENST00000574755 NID1P14543 1247 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 OPRL1P41146 370 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 MLLT3P42568 568 aaPredicted RBP13.07□□□□□ -0.32
VPS33B-208ENST00000574755 RFX3P48380 749 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 RNF144AP50876 292 aaPredicted RBP13.07□□□□□ -0.32
VPS33B-208ENST00000574755 POU6F2P78424 691 aaPredicted RBP13.07□□□□□ -0.32
VPS33B-208ENST00000574755 STX4Q12846 297 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 MRPL2Q5T653 305 aaKnown RBP13.07□□□□□ -0.32
VPS33B-208ENST00000574755 COL13A1Q5TAT6 717 aaPredicted RBP13.07□□□□□ -0.32
VPS33B-208ENST00000574755 C16orf87Q6PH81 154 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 ARHGAP22Q7Z5H3 698 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 GALNT12Q8IXK2 581 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 NRMQ8IXM6 262 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 CACTIN-AS1Q8N1I8 211 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 FAM26EQ8N5C1 309 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 TMEM80Q96HE8 168 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 TGM7Q96PF1 710 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 MGLLQ99685 303 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 TSSK6Q9BXA6 273 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 SAP130Q9H0E3 1048 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 UCK1Q9HA47 277 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 SOHLH2Q9NX45 425 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 MRPS33Q9Y291 106 aaKnown RBP13.07□□□□□ -0.32
VPS33B-208ENST00000574755 ABCA7Q8IZY2 2146 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 SPAG17Q6Q759 2223 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 LOC100506127A0A0U1RQW1 187 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 J3QRK9 145 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 COQ9O75208 318 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 CBX7O95931 251 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 IFI6P09912 130 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 GKN3PP0CG01 181 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 RPS4Y1P22090 263 aaKnown RBP13.06□□□□□ -0.32
VPS33B-208ENST00000574755 MAP3K8P41279 467 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 GPR4P46093 362 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 ZNF136P52737 540 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 HNRNPKP61978 463 aaKnown RBP eCLIP13.06□□□□□ -0.32
VPS33B-208ENST00000574755 MAT1AQ00266 395 aaKnown RBP13.06□□□□□ -0.32
VPS33B-208ENST00000574755 MAP4K2Q12851 820 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 SYT14P1Q58G82 188 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 RASSF6Q6ZTQ3 369 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 SLC34A3Q8N130 599 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 RBM18Q96H35 190 aaKnown RBP13.06□□□□□ -0.32
VPS33B-208ENST00000574755 PLEKHA8Q96JA3 519 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 ALOXE3Q9BYJ1 711 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 PCED1AQ9H1Q7 454 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 DCSTAMPQ9H295 470 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 KCNE5Q9UJ90 142 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 ERGIC3Q9Y282 383 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 CORINQ9Y5Q5 1042 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 hCG_2014768A0A024R1R8 64 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 GXYLT2A0PJZ3 443 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 FOXS1O43638 330 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 IL9P15248 144 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 PTNP21246 168 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 CSTF2P33240 577 aaKnown RBP eCLIP13.06□□□□□ -0.32
VPS33B-208ENST00000574755 GFERP55789 205 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 NCF4Q15080 339 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 CLEC12AQ5QGZ9 265 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 MBOAT2Q6ZWT7 520 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 SIX5Q8N196 739 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 OR8D4Q8NGM9 314 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 RIT1Q92963 219 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 SH3YL1Q96HL8 342 aaPredicted RBP13.06□□□□□ -0.32
VPS33B-208ENST00000574755 SHDQ96IW2 340 aa13.06□□□□□ -0.32
VPS33B-208ENST00000574755 HYKKA2RU49 373 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 CDHR4A6H8M9 788 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 PIP5K1CO60331 668 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 BRINP1O60477 761 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 PRG2P13727 222 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 FPR3P25089 353 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 GRK5P34947 590 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 STARD6P59095 220 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 ERV3-1Q14264 604 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 NR1D2Q14995 579 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 ZC3H14Q6PJT7 736 aaKnown RBP13.05□□□□□ -0.32
VPS33B-208ENST00000574755 TOR1AIP2Q8NFQ8 470 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms