RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 FAIM2Q9BWQ8 316 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 ABCG5Q9H222 651 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 POLHQ9Y253 713 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 IGKV1-8A0A0C4DH67 115 aa16.33■□□□□ 0.21
SCARF1-205ENST00000571272 PRRT4C9JH25 899 aa16.33■□□□□ 0.21
SCARF1-205ENST00000571272 PCCBP05166 539 aa16.33■□□□□ 0.21
SCARF1-205ENST00000571272 SDHBP21912 280 aa16.33■□□□□ 0.21
SCARF1-205ENST00000571272 SHC1P29353 583 aa16.33■□□□□ 0.21
SCARF1-205ENST00000571272 HOXD11P31277 338 aaPredicted RBP16.33■□□□□ 0.21
SCARF1-205ENST00000571272 MC3RP41968 323 aa16.33■□□□□ 0.21
SCARF1-205ENST00000571272 RGS8P57771 180 aaPredicted RBP16.33■□□□□ 0.21
SCARF1-205ENST00000571272 STXBP1P61764 594 aaKnown RBP16.33■□□□□ 0.21
SCARF1-205ENST00000571272 PGGHGQ32M88 737 aa16.33■□□□□ 0.21
SCARF1-205ENST00000571272 FNDC3BQ53EP0 1204 aaKnown RBP16.33■□□□□ 0.21
SCARF1-205ENST00000571272 PLEKHM3Q6ZWE6 761 aa16.33■□□□□ 0.21
SCARF1-205ENST00000571272 CREB3L2Q70SY1 520 aa16.33■□□□□ 0.21
SCARF1-205ENST00000571272 KRT74Q7RTS7 529 aa16.33■□□□□ 0.21
SCARF1-205ENST00000571272 C7orf57Q8NEG2 295 aa16.33■□□□□ 0.21
SCARF1-205ENST00000571272 OR8H1Q8NGG4 311 aa16.33■□□□□ 0.21
SCARF1-205ENST00000571272 SUN5Q8TC36 379 aa16.33■□□□□ 0.21
SCARF1-205ENST00000571272 SAMD8Q96LT4 415 aa16.33■□□□□ 0.21
SCARF1-205ENST00000571272 SMAD5Q99717 465 aaKnown RBP16.33■□□□□ 0.21
SCARF1-205ENST00000571272 THAP7Q9BT49 309 aaPredicted RBP16.33■□□□□ 0.21
SCARF1-205ENST00000571272 IMP3Q9NV31 184 aaKnown RBP16.33■□□□□ 0.21
SCARF1-205ENST00000571272 ADAM29Q9UKF5 820 aa16.33■□□□□ 0.21
SCARF1-205ENST00000571272 CDC42EP2O14613 210 aa16.33■□□□□ 0.2
SCARF1-205ENST00000571272 SLC19A2O60779 497 aa16.33■□□□□ 0.2
SCARF1-205ENST00000571272 THY1P04216 161 aa16.33■□□□□ 0.2
SCARF1-205ENST00000571272 EIF4EP06730 217 aaKnown RBP16.33■□□□□ 0.2
SCARF1-205ENST00000571272 CISD3P0C7P0 127 aa16.33■□□□□ 0.2
SCARF1-205ENST00000571272 EPHA5P54756 1037 aa16.33■□□□□ 0.2
SCARF1-205ENST00000571272 RIN1Q13671 783 aa16.33■□□□□ 0.2
SCARF1-205ENST00000571272 GNA13Q14344 377 aa16.33■□□□□ 0.2
SCARF1-205ENST00000571272 ARHGAP19Q14CB8 494 aa16.33■□□□□ 0.2
SCARF1-205ENST00000571272 SMUG1Q53HV7 270 aa16.33■□□□□ 0.2
SCARF1-205ENST00000571272 SMARCD3Q6STE5 483 aa16.33■□□□□ 0.2
SCARF1-205ENST00000571272 REM2Q8IYK8 340 aaPredicted RBP16.33■□□□□ 0.2
SCARF1-205ENST00000571272 FAM109AQ8N4B1 249 aa16.33■□□□□ 0.2
SCARF1-205ENST00000571272 SAMD12Q8N8I0 201 aa16.33■□□□□ 0.2
SCARF1-205ENST00000571272 KAT2AQ92830 837 aa16.33■□□□□ 0.2
SCARF1-205ENST00000571272 CREB3L1Q96BA8 519 aa16.33■□□□□ 0.2
SCARF1-205ENST00000571272 PAK6Q9NQU5 681 aaPredicted RBP16.33■□□□□ 0.2
SCARF1-205ENST00000571272 IL20Q9NYY1 176 aa16.33■□□□□ 0.2
SCARF1-205ENST00000571272 ZSCAN5BA6NJL1 495 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 HIDE1A8MVS5 230 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 EEF1E1O43324 174 aaKnown RBP16.32■□□□□ 0.2
SCARF1-205ENST00000571272 TPD52L2O43399 206 aaKnown RBP16.32■□□□□ 0.2
SCARF1-205ENST00000571272 RNF13O43567 381 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 NOS1APO75052 506 aaPredicted RBP16.32■□□□□ 0.2
SCARF1-205ENST00000571272 IGHA1P01876 353 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 PTBP1P26599 531 aaKnown RBP eCLIP16.32■□□□□ 0.2
SCARF1-205ENST00000571272 SLC6A1P30531 599 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 HTR1FP30939 366 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 SRP9P49458 86 aaKnown RBP16.32■□□□□ 0.2
SCARF1-205ENST00000571272 DPTQ07507 201 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 ARHGAP15Q53QZ3 475 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 ANKRD54Q6NXT1 300 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 PLBD1Q6P4A8 553 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 BHLHB9Q6PI77 547 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 ZNF767PQ75MW2 155 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 OR9A2Q8NGT5 310 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 OR52N1Q8NH53 320 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 LRRC3BQ96PB8 259 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 TEX12Q9BXU0 123 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 ASB6Q9NWX5 421 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 STMN3Q9NZ72 180 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 NCKAP1Q9Y2A7 1128 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 EXOGQ9Y2C4 368 aaKnown RBP16.32■□□□□ 0.2
SCARF1-205ENST00000571272 SCN3AQ9NY46 2000 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 ANTXRLA6NF34 631 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 FUT1P19526 365 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 TBXA2RP21731 343 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 ANXA11P50995 505 aaKnown RBP16.32■□□□□ 0.2
SCARF1-205ENST00000571272 ATP12AP54707 1039 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 CLDN2P57739 230 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 OR10A3P58181 314 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 RNASE12Q5GAN4 147 aaKnown RBP16.32■□□□□ 0.2
SCARF1-205ENST00000571272 SIGIRRQ6IA17 410 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 ZNF765Q7L2R6 523 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 LRRTM4Q86VH4 590 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 SFTPA1Q8IWL2 248 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 ACOT11Q8WXI4 607 aaPredicted RBP16.32■□□□□ 0.2
SCARF1-205ENST00000571272 MED30Q96HR3 178 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 DEFB118Q96PH6 123 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 FERD3LQ96RJ6 166 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 MCHR1Q99705 422 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 MKRN2Q9H000 416 aaKnown RBP16.32■□□□□ 0.2
SCARF1-205ENST00000571272 OSGEPL1Q9H4B0 414 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 ENAMQ9NRM1 1142 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 DNAH14Q0VDD8 3507 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 POU3F3P20264 500 aaPredicted RBP16.32■□□□□ 0.2
SCARF1-205ENST00000571272 IFNA8P32881 189 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 GCGRP47871 477 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 ZNF620Q6ZNG0 422 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 C16orf62Q7Z3J2 963 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 C9orf62Q8N4C0 152 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 ACOT4Q8N9L9 421 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 NUP43Q8NFH3 380 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 RFT1Q96AA3 541 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 ZNF764Q96H86 408 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms