RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 CLK3P49761 638 aaKnown RBP17.05■□□□□ 0.32
SCARF1-204ENST00000570902 TNK1Q13470 666 aa17.05■□□□□ 0.32
SCARF1-204ENST00000570902 HEPACAMQ14CZ8 416 aa17.05■□□□□ 0.32
SCARF1-204ENST00000570902 TSNAXIP1Q2TAA8 658 aa17.05■□□□□ 0.32
SCARF1-204ENST00000570902 CYP27C1Q4G0S4 372 aa17.05■□□□□ 0.32
SCARF1-204ENST00000570902 HEPHL1Q6MZM0 1159 aa17.05■□□□□ 0.32
SCARF1-204ENST00000570902 FAM9CQ8IZT9 166 aa17.05■□□□□ 0.32
SCARF1-204ENST00000570902 NANOS1Q8WY41 292 aaKnown RBP17.05■□□□□ 0.32
SCARF1-204ENST00000570902 C1GALT1C1Q96EU7 318 aa17.05■□□□□ 0.32
SCARF1-204ENST00000570902 PRRG4Q9BZD6 226 aa17.05■□□□□ 0.32
SCARF1-204ENST00000570902 SHCBP1LQ9BZQ2 653 aa17.05■□□□□ 0.32
SCARF1-204ENST00000570902 ACSS3Q9H6R3 686 aa17.05■□□□□ 0.32
SCARF1-204ENST00000570902 NFU1Q9UMS0 254 aa17.05■□□□□ 0.32
SCARF1-204ENST00000570902 FADS1O60427 444 aa17.04■□□□□ 0.32
SCARF1-204ENST00000570902 SOX30O94993 753 aa17.04■□□□□ 0.32
SCARF1-204ENST00000570902 PLGP00747 810 aaPredicted RBP17.04■□□□□ 0.32
SCARF1-204ENST00000570902 ZNF155Q12901 538 aaPredicted RBP17.04■□□□□ 0.32
SCARF1-204ENST00000570902 STX5Q13190 355 aa17.04■□□□□ 0.32
SCARF1-204ENST00000570902 CAPRIN1Q14444 709 aaKnown RBP17.04■□□□□ 0.32
SCARF1-204ENST00000570902 ETFDHQ16134 617 aa17.04■□□□□ 0.32
SCARF1-204ENST00000570902 RELL1Q8IUW5 271 aa17.04■□□□□ 0.32
SCARF1-204ENST00000570902 OR5M1Q8NGP8 315 aa17.04■□□□□ 0.32
SCARF1-204ENST00000570902 ZNF483Q8TF39 744 aaPredicted RBP17.04■□□□□ 0.32
SCARF1-204ENST00000570902 PLPPR2Q96GM1 343 aa17.04■□□□□ 0.32
SCARF1-204ENST00000570902 GMPPAQ96IJ6 420 aaPredicted RBP17.04■□□□□ 0.32
SCARF1-204ENST00000570902 HBEGFQ99075 208 aa17.04■□□□□ 0.32
SCARF1-204ENST00000570902 TMEM204Q9BSN7 226 aa17.04■□□□□ 0.32
SCARF1-204ENST00000570902 SLC35C2Q9NQQ7 365 aa17.04■□□□□ 0.32
SCARF1-204ENST00000570902 FAM120CQ9NX05 1096 aaKnown RBP17.04■□□□□ 0.32
SCARF1-204ENST00000570902 MRTO4Q9UKD2 239 aaKnown RBP17.04■□□□□ 0.32
SCARF1-204ENST00000570902 CHD3Q12873 2000 aaKnown RBP17.04■□□□□ 0.32
SCARF1-204ENST00000570902 HEATR5AQ86XA9 2040 aa17.04■□□□□ 0.32
SCARF1-204ENST00000570902 GNG14A0A1W2PPG7 69 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 PCDH7O60245 1069 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 AQP8O94778 261 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 SLITRK5O94991 958 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 KRT6AP02538 564 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 KRT6BP04259 564 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 NID1P14543 1247 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 IL11P20809 199 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 KRT6CP48668 564 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 CTBP2P56545 445 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 RPS4XP62701 263 aaKnown RBP17.03■□□□□ 0.32
SCARF1-204ENST00000570902 PSG6Q00889 435 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 KRTAP1-1Q07627 177 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 CSTF3Q12996 717 aaKnown RBP17.03■□□□□ 0.32
SCARF1-204ENST00000570902 DECR1Q16698 335 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 CLEC12BQ2HXU8 276 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 SH2D4BQ5SQS7 431 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 PPP4R4Q6NUP7 873 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 STAC2Q6ZMT1 411 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 RPS27LQ71UM5 84 aaKnown RBP17.03■□□□□ 0.32
SCARF1-204ENST00000570902 OR7G2Q8NG99 324 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 DUSP19Q8WTR2 217 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 OR10A4Q9H209 315 aa17.03■□□□□ 0.32
SCARF1-204ENST00000570902 PAQR5Q9NXK6 330 aaPredicted RBP17.03■□□□□ 0.32
SCARF1-204ENST00000570902 STAB1Q9NY15 2570 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 PPP6CO00743 305 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 SS18L1O75177 396 aaPredicted RBP17.02■□□□□ 0.32
SCARF1-204ENST00000570902 PLAUP00749 431 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 IFNA2P01563 188 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 TP53P04637 393 aaPredicted RBP17.02■□□□□ 0.32
SCARF1-204ENST00000570902 COL6A2P12110 1019 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 MAGEA12P43365 314 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 PSMD4P55036 377 aaKnown RBP17.02■□□□□ 0.32
SCARF1-204ENST00000570902 CDH13P55290 713 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 VEZF1Q14119 521 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 SPIN4Q56A73 249 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 PODNL1Q6PEZ8 512 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 BEND4Q6ZU67 534 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 STK32CQ86UX6 486 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 WFDC8Q8IUA0 241 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 IFT20Q8IY31 132 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 AKAP1Q92667 903 aaKnown RBP eCLIP17.02■□□□□ 0.32
SCARF1-204ENST00000570902 TRMT61AQ96FX7 289 aaKnown RBP17.02■□□□□ 0.32
SCARF1-204ENST00000570902 BBS4Q96RK4 519 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 MRPL57Q9BQC6 102 aaKnown RBP17.02■□□□□ 0.32
SCARF1-204ENST00000570902 RHOXF2Q9BQY4 288 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 C1QTNF3Q9BXJ4 246 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 ACTR6Q9GZN1 396 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 MRPL46Q9H2W6 279 aaKnown RBP17.02■□□□□ 0.32
SCARF1-204ENST00000570902 GLRX2Q9NS18 164 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 LAMP3Q9UQV4 416 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 GPR52Q9Y2T5 361 aa17.02■□□□□ 0.32
SCARF1-204ENST00000570902 MXRA5Q9NR99 2828 aa17.01■□□□□ 0.31
SCARF1-204ENST00000570902 A0A087WV62 115 aa17.01■□□□□ 0.31
SCARF1-204ENST00000570902 RNF212BA8MTL3 300 aa17.01■□□□□ 0.31
SCARF1-204ENST00000570902 RNF223E7ERA6 249 aa17.01■□□□□ 0.31
SCARF1-204ENST00000570902 POC1B-GALNT4F8VUJ3 575 aa17.01■□□□□ 0.31
SCARF1-204ENST00000570902 MANBAO00462 879 aa17.01■□□□□ 0.31
SCARF1-204ENST00000570902 OR4F21O95013 312 aa17.01■□□□□ 0.31
SCARF1-204ENST00000570902 INHBAP08476 426 aa17.01■□□□□ 0.31
SCARF1-204ENST00000570902 TSPAN8P19075 237 aa17.01■□□□□ 0.31
SCARF1-204ENST00000570902 GSTM5P46439 218 aa17.01■□□□□ 0.31
SCARF1-204ENST00000570902 EIF1AXP47813 144 aaKnown RBP17.01■□□□□ 0.31
SCARF1-204ENST00000570902 RASA2Q15283 850 aa17.01■□□□□ 0.31
SCARF1-204ENST00000570902 ZNHIT3Q15649 155 aaPredicted RBP17.01■□□□□ 0.31
SCARF1-204ENST00000570902 HMBOX1Q6NT76 420 aa17.01■□□□□ 0.31
SCARF1-204ENST00000570902 GGNQ86UU5 652 aa17.01■□□□□ 0.31
SCARF1-204ENST00000570902 FUT8Q9BYC5 575 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms