RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 KIF18BQ86Y91 864 aa15.48■□□□□ 0.07
MAP1LC3B-208ENST00000570189 CDRT4Q8N9R6 151 aa15.48■□□□□ 0.07
MAP1LC3B-208ENST00000570189 OR2M3Q8NG83 312 aa15.48■□□□□ 0.07
MAP1LC3B-208ENST00000570189 GOT1L1Q8NHS2 421 aaPredicted RBP15.48■□□□□ 0.07
MAP1LC3B-208ENST00000570189 TCP10LQ8TDR4 215 aa15.48■□□□□ 0.07
MAP1LC3B-208ENST00000570189 PPCDCQ96CD2 204 aa15.48■□□□□ 0.07
MAP1LC3B-208ENST00000570189 GIMAP5Q96F15 307 aa15.48■□□□□ 0.07
MAP1LC3B-208ENST00000570189 SFXN2Q96NB2 322 aa15.48■□□□□ 0.07
MAP1LC3B-208ENST00000570189 SLC17A7Q9P2U7 560 aa15.48■□□□□ 0.07
MAP1LC3B-208ENST00000570189 DKKL1Q9UK85 242 aa15.48■□□□□ 0.07
MAP1LC3B-208ENST00000570189 MED13LQ71F56 2210 aa15.48■□□□□ 0.07
MAP1LC3B-208ENST00000570189 NUP214P35658 2090 aaPredicted RBP15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 CLCA1A8K7I4 914 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 TYROBPO43914 113 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 KCNH1O95259 989 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 CRHP06850 196 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 LINC00032P0C843 101 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 TMIGD3P0DMS9 266 aaPredicted RBP15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 BCKDHAP12694 445 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 PEPDP12955 493 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 MAPK1P28482 360 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 RPL3P39023 403 aaKnown RBP15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 ETV4P43268 484 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 IFFO1Q0D2I5 559 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 OR4K17Q8NGC6 315 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 PSMA8Q8TAA3 256 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 FAM110BQ8TC76 370 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 NINJ1Q92982 152 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 PPP3R2Q96LZ3 170 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 MS4A4EQ96PG1 132 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 TSSK3Q96PN8 268 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 PIGMQ9H3S5 423 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 GIN1Q9NXP7 522 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 CRIM1Q9NZV1 1036 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 ATP6V1HQ9UI12 483 aa15.47■□□□□ 0.07
MAP1LC3B-208ENST00000570189 TMEM114B3SHH9 223 aa15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 TMEM233B4DJY2 109 aa15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 PIP5K1BO14986 540 aa15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 HSPA4LO95757 839 aa15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 UQCRC1P31930 480 aa15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 CLK3P49761 638 aaKnown RBP15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 C17orf67Q0P5P2 114 aa15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 HSPB3Q12988 150 aa15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 OR5M10Q6IEU7 315 aa15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 TMEM200AQ86VY9 491 aa15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 NATD1Q8N6N6 113 aa15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 GFM2Q969S9 779 aaKnown RBP15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 CIDECQ96AQ7 238 aaPredicted RBP15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 C1GALT1C1Q96EU7 318 aa15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 ZIM3Q96PE6 472 aa15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 MECRQ9BV79 373 aa15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 RTN4RQ9BZR6 473 aa15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 DSN1Q9H410 356 aa15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 PTGES2Q9H7Z7 377 aa15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 RASSF1Q9NS23 344 aa15.46■□□□□ 0.07
MAP1LC3B-208ENST00000570189 ALG1L2C9J202 215 aa15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 SCAMP2O15127 329 aaKnown RBP15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 EMC8O43402 210 aa15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 SCO2O43819 266 aa15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 LYPLA1O75608 230 aaPredicted RBP15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 SOX30O94993 753 aa15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 BPGMP07738 259 aa15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ARRB2P32121 409 aa15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 GABRA3P34903 492 aa15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 GPC1P35052 558 aa15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 MANFP55145 182 aaKnown RBP15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 C21orf58P58505 322 aa15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 TMEM44Q2T9K0 475 aa15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 SH2D4BQ5SQS7 431 aa15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ANKRD26P1Q6NSI1 321 aa15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 MFSD12Q6NUT3 480 aa15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 NUP43Q8NFH3 380 aa15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 SSU72Q9NP77 194 aaKnown RBP15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 FLRT3Q9NZU0 649 aa15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 SH3BP4Q9P0V3 963 aa15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 BAIAP2L1Q9UHR4 511 aa15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 FIS1Q9Y3D6 152 aa15.45■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ABCA4P78363 2273 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 A6NNC1 897 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 C17orf51A8MQB3 221 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 AKAP10O43572 662 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 UTS2O95399 124 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 IGKV1D-16P01601 117 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 TBXA2RP21731 343 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 HPCAL1P37235 193 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 STARP49675 285 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 DGKQP52824 942 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 EEFSECP57772 596 aaKnown RBP15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 FOXF2Q12947 444 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 SMU1Q2TAY7 513 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 GALNTL6Q49A17 601 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 OR2A2Q6IF42 318 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 DDIASQ8IXT1 998 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ZZZ3Q8IYH5 903 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 GPR151Q8TDV0 419 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 STACQ99469 402 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 PIGQQ9BRB3 760 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 TBL1XR1Q9BZK7 514 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 DUSP22Q9NRW4 184 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms